Bo5g002880 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g002880 T292395_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.906 0.731
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.906 0.731
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g002880.1 NAC/NAM 4 128

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra033298 Brassica rapa Bra033298 I 0.993
NAC004 Arabidopsis thaliana AT1G02230 D 0.906
anac005 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000123 I 0.901
Bostr.5325s0016 Boechera stricta Bostr.5325s0016 I 0.899
ANAC004 Arabidopsis lyrata Al_scaffold_0001_137 I 0.898
Bo5g002950 Brassica oleracea Bo5g002950 I 0.882
Bra033306 Brassica rapa Bra033306 I 0.880