Bo6g123980 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo6g123980 T292439_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.966 0.991
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.966 0.991
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.936 0.851
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.923 0.833
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.923 0.833
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.917 0.825
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.910 0.851
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g123980.1 NAC/NAM 18 146

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

280 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07581 Aegilops tauschii F775_07581 I 0.000
F775_13221 Aegilops tauschii F775_13221 I 0.000
F775_09486 Aegilops tauschii F775_09486 I 0.000
AMTR_s00033p00241280 Amborella trichopoda AMTR_s00033p00241280 I 0.000
AMTR_s00093p00110710 Amborella trichopoda AMTR_s00093p00110710 I 0.000
AMTR_s00122p00127250 Amborella trichopoda AMTR_s00122p00127250 I 0.000
Aquca_026_00236 Aquilegia coerulea Aquca_026_00236 I 0.000
Aquca_010_00298 Aquilegia coerulea Aquca_010_00298 I 0.000
Aquca_001_00694 Aquilegia coerulea Aquca_001_00694 I 0.000
Al_scaffold_0001_2706 Arabidopsis lyrata Al_scaffold_0001_2706 I 0.000
fgenesh2_kg.1__4045__AT1G49560.1 Arabidopsis lyrata fgenesh2_kg.1__4045__AT1G49560.1 I 0.000
scaffold_500333.1 Arabidopsis lyrata scaffold_500333.1 I 0.000
fgenesh2_kg.2__1124__AT1G68670.1 Arabidopsis lyrata fgenesh2_kg.2__1124__AT1G68670.1 I 0.000
HHO2 Arabidopsis thaliana AT1G68670 D 0.000
HHO1 Arabidopsis thaliana AT3G25790 I 0.000
EFM Arabidopsis thaliana AT2G03500 D 0.000
HHO6 Arabidopsis thaliana AT1G49560 D 0.000
HHO3 Arabidopsis thaliana AT1G25550 D 0.000
Bostr.26675s0216 Boechera stricta Bostr.26675s0216 I 0.000
Bostr.0556s0172 Boechera stricta Bostr.0556s0172 I 0.000
Bostr.26959s0022 Boechera stricta Bostr.26959s0022 I 0.000
Bostr.0556s0249 Boechera stricta Bostr.0556s0249 I 0.000
Bostr.12659s0399 Boechera stricta Bostr.12659s0399 I 0.000
BRADI1G07630 Brachypodium distachyon BRADI1G07630 I 0.000
BRADI1G58830 Brachypodium distachyon BRADI1G58830 I 0.000
BRADI3G10730 Brachypodium distachyon BRADI3G10730 I 0.000
Bo6g107160 Brassica oleracea Bo6g107160 I 0.000
Bo7g081380 Brassica oleracea Bo7g081380 I 0.000
Bo2g061130 Brassica oleracea Bo2g061130 I 0.000
Bo6g018370 Brassica oleracea Bo6g018370 I 0.000
Bo7g082060 Brassica oleracea Bo7g082060 I 0.000
Bo2g137000 Brassica oleracea Bo2g137000 I 0.000
Bra004330 Brassica rapa Bra004330 I 0.000
Bra018794 Brassica rapa Bra018794 I 0.000
Bra025115 Brassica rapa Bra025115 I 0.000
Bra026548 Brassica rapa Bra026548 I 0.000
Bra038360 Brassica rapa Bra038360 I 0.000
Bra040662 Brassica rapa Bra040662 I 0.000
PK14402.1 Cannabis sativa PK14402.1 D 0.000
PK19779.1 Cannabis sativa PK19779.1 D 0.000
PK20621.1 Cannabis sativa PK20621.1 I 0.000
PK04145.1 Cannabis sativa PK04145.1 I 0.000
Cagra.3534s0002 Capsella grandiflora Cagra.3534s0002 I 0.000
Cagra.3545s0007 Capsella grandiflora Cagra.3545s0007 I 0.000
Cagra.3392s0001 Capsella grandiflora Cagra.3392s0001 I 0.000
Cagra.0613s0015 Capsella grandiflora Cagra.0613s0015 I 0.000
Cagra.0167s0004 Capsella grandiflora Cagra.0167s0004 I 0.000
Carubv10009677m.g Capsella rubella Carubv10009677m.g I 0.000
Carubv10017308m.g Capsella rubella Carubv10017308m.g I 0.000
Carubv10018983m.g Capsella rubella Carubv10018983m.g I 0.000
Carubv10020552m.g Capsella rubella Carubv10020552m.g I 0.000
Carubv10009492m.g Capsella rubella Carubv10009492m.g I 0.000
evm.TU.supercontig_6.397 Carica papaya evm.TU.supercontig_6.397 I 0.000
evm.TU.supercontig_127.55 Carica papaya evm.TU.supercontig_127.55 I 0.000
evm.TU.supercontig_1.213 Carica papaya evm.TU.supercontig_1.213 I 0.000
evm.TU.supercontig_62.51 Carica papaya evm.TU.supercontig_62.51 I 0.000
Ca_06422 Cicer arietinum Ca_06422 I 0.000
Ca_02122 Cicer arietinum Ca_02122 I 0.000
Ca_06627 Cicer arietinum Ca_06627 I 0.000
Cla017007 Citrullus lanatus Cla017007 I 0.000
Cla001846 Citrullus lanatus Cla001846 I 0.000
Cla008104 Citrullus lanatus Cla008104 I 0.000
Cla012503 Citrullus lanatus Cla012503 I 0.000
Cla016244 Citrullus lanatus Cla016244 I 0.000
Cla020676 Citrullus lanatus Cla020676 I 0.000
Ciclev10008096m.g Citrus clementina Ciclev10008096m.g I 0.000
Ciclev10031793m.g Citrus clementina Ciclev10031793m.g I 0.000
Ciclev10028556m.g Citrus clementina Ciclev10028556m.g I 0.000
orange1.1g011048m.g Citrus sinensis orange1.1g011048m.g I 0.000
orange1.1g015403m.g Citrus sinensis orange1.1g015403m.g I 0.000
orange1.1g016585m.g Citrus sinensis orange1.1g016585m.g I 0.000
Cucsa.102260 Cucumis sativus Cucsa.102260 I 0.000
Cucsa.365440 Cucumis sativus Cucsa.365440 I 0.000
Cucsa.283860 Cucumis sativus Cucsa.283860 I 0.000
Cucsa.220080 Cucumis sativus Cucsa.220080 I 0.000
Cucsa.082250 Cucumis sativus Cucsa.082250 I 0.000
Cucsa.116140 Cucumis sativus Cucsa.116140 I 0.000
Cucsa.110080 Cucumis sativus Cucsa.110080 I 0.000
Eucgr.I01178 Eucalyptus grandis Eucgr.I01178 I 0.000
Eucgr.C04155 Eucalyptus grandis Eucgr.C04155 I 0.000
Eucgr.G01503 Eucalyptus grandis Eucgr.G01503 I 0.000
Eucgr.G02343 Eucalyptus grandis Eucgr.G02343 I 0.000
Eucgr.H01993 Eucalyptus grandis Eucgr.H01993 I 0.000
Thhalv10018737m.g Eutrema salsugineum Thhalv10018737m.g I 0.000
Thhalv10011605m.g Eutrema salsugineum Thhalv10011605m.g I 0.000
Thhalv10004475m.g Eutrema salsugineum Thhalv10004475m.g I 0.000
Thhalv10004257m.g Eutrema salsugineum Thhalv10004257m.g I 0.000
Thhalv10008115m.g Eutrema salsugineum Thhalv10008115m.g I 0.000
gene31899-v1.0-hybrid Fragaria vesca gene31899-v1.0-hybrid I 0.000
gene30953-v1.0-hybrid Fragaria vesca gene30953-v1.0-hybrid I 0.000
gene24094-v1.0-hybrid Fragaria vesca gene24094-v1.0-hybrid I 0.000
GLYMA01G39040 Glycine max GLYMA01G39040 I 0.000
GLYMA07G33130 Glycine max GLYMA07G33130 I 0.000
GLYMA06G23902 Glycine max GLYMA06G23902 I 0.000
GLYMA05G08150 Glycine max GLYMA05G08150 I 0.000
GLYMA04G21680 Glycine max GLYMA04G21680 I 0.000
GLYMA02G15320 Glycine max GLYMA02G15320 I 0.000
GLYMA10G34780 Glycine max GLYMA10G34780 I 0.000
GLYMA11G06230 Glycine max GLYMA11G06230 I 0.000
GLYMA17G12720 Glycine max GLYMA17G12720 I 0.000
GLYMA17G20520 Glycine max GLYMA17G20520 I 0.000
Gorai.008G026300 Gossypium raimondii Gorai.008G026300 I 0.000
Gorai.013G080200 Gossypium raimondii Gorai.013G080200 I 0.000
Gorai.013G040600 Gossypium raimondii Gorai.013G040600 I 0.000
Gorai.012G150500 Gossypium raimondii Gorai.012G150500 I 0.000
Gorai.009G022100 Gossypium raimondii Gorai.009G022100 I 0.000
Gorai.008G185500 Gossypium raimondii Gorai.008G185500 I 0.000
Gorai.008G073300 Gossypium raimondii Gorai.008G073300 I 0.000
Gorai.001G002800 Gossypium raimondii Gorai.001G002800 I 0.000
Gorai.003G021300 Gossypium raimondii Gorai.003G021300 I 0.000
Gorai.007G053100 Gossypium raimondii Gorai.007G053100 I 0.000
MLOC_72007 Hordeum vulgare MLOC_72007 I 0.000
MLOC_67453 Hordeum vulgare MLOC_67453 I 0.000
MLOC_61146 Hordeum vulgare MLOC_61146 I 0.000
LPERR02G11880 Leersia perrieri LPERR02G11880 I 0.000
Lus10021699.g Linum usitatissimum Lus10021699.g I 0.000
Lus10012056.g Linum usitatissimum Lus10012056.g I 0.000
Lus10043304.g Linum usitatissimum Lus10043304.g I 0.000
Lus10041485.g Linum usitatissimum Lus10041485.g I 0.000
Lus10035043.g Linum usitatissimum Lus10035043.g I 0.000
Lus10034280.g Linum usitatissimum Lus10034280.g I 0.000
chr2.LjT16G06.130.nd Lotus japonicus chr2.LjT16G06.130.nd I 0.000
LjSGA_025851.1 Lotus japonicus LjSGA_025851.1 I 0.000
MDP0000504079 Malus domestica MDP0000504079 I 0.000
MDP0000128135 Malus domestica MDP0000128135 I 0.000
MDP0000703817 Malus domestica MDP0000703817 I 0.000
MDP0000265555 Malus domestica MDP0000265555 I 0.000
MDP0000202657 Malus domestica MDP0000202657 I 0.000
MDP0000200243 Malus domestica MDP0000200243 I 0.000
cassava29869.valid.m1 Manihot esculenta cassava29869.valid.m1 I 0.000
cassava11986.valid.m1 Manihot esculenta cassava11986.valid.m1 I 0.000
cassava20352.m1 Manihot esculenta cassava20352.m1 I 0.000
cassava24190.valid.m1 Manihot esculenta cassava24190.valid.m1 I 0.000
cassava29454.valid.m1 Manihot esculenta cassava29454.valid.m1 I 0.000
cassava43327.valid.m1 Manihot esculenta cassava43327.valid.m1 I 0.000
cassava11434.m1 Manihot esculenta cassava11434.m1 I 0.000
cassava11925.valid.m1 Manihot esculenta cassava11925.valid.m1 I 0.000
MTR_4g113140 Medicago truncatula MTR_4g113140 I 0.000
MTR_4g086835 Medicago truncatula MTR_4g086835 I 0.000
MTR_5g017980 Medicago truncatula MTR_5g017980 I 0.000
mgf023459m Mimulus guttatus mgf023459m I 0.000
mgf006847m Mimulus guttatus mgf006847m I 0.000
mgf007637m Mimulus guttatus mgf007637m I 0.000
mgf011229m Mimulus guttatus mgf011229m I 0.000
mgf013442m Mimulus guttatus mgf013442m I 0.000
GSMUA_Achr11G13410_001 Musa acuminata GSMUA_Achr11G13410_001 I 0.000
GSMUA_Achr6G05330_001 Musa acuminata GSMUA_Achr6G05330_001 I 0.000
GSMUA_Achr3G21090_001 Musa acuminata GSMUA_Achr3G21090_001 I 0.000
GSMUA_Achr10G27180_001 Musa acuminata GSMUA_Achr10G27180_001 I 0.000
GSMUA_Achr10G08270_001 Musa acuminata GSMUA_Achr10G08270_001 I 0.000
GSMUA_Achr6G34680_001 Musa acuminata GSMUA_Achr6G34680_001 I 0.000
GSMUA_Achr9G09630_001 Musa acuminata GSMUA_Achr9G09630_001 I 0.000
GSMUA_Achr9G26570_001 Musa acuminata GSMUA_Achr9G26570_001 I 0.000
OBART03G35220 Oryza barthii OBART03G35220 I 0.000
OBART07G01330 Oryza barthii OBART07G01330 I 0.000
OBART02G14690 Oryza barthii OBART02G14690 I 0.000
OB03G42230 Oryza brachyantha OB03G42230 I 0.000
OB07G11040 Oryza brachyantha OB07G11040 I 0.000
OB02G22950 Oryza brachyantha OB02G22950 I 0.000
ORGLA10G0167800 Oryza glaberrima ORGLA10G0167800 I 0.000
ORGLA01G0412400 Oryza glaberrima ORGLA01G0412400 I 0.000
ORGLA02G0127400 Oryza glaberrima ORGLA02G0127400 I 0.000
ORGLA03G0322500 Oryza glaberrima ORGLA03G0322500 I 0.000
ORGLA07G0012100 Oryza glaberrima ORGLA07G0012100 I 0.000
OGLUM02G14610 Oryza glumaepatula OGLUM02G14610 I 0.000
BGIOSGA025055 Oryza indica BGIOSGA025055 I 0.000
BGIOSGA013620 Oryza indica BGIOSGA013620 I 0.000
OLONG_018167 Oryza longistaminata OLONG_018167 I 0.000
OLONG_003720 Oryza longistaminata OLONG_003720 I 0.000
OLONG_019215 Oryza longistaminata OLONG_019215 I 0.000
OMERI02G14870 Oryza meridionalis OMERI02G14870 I 0.000
ONIVA02G15910 Oryza nivara ONIVA02G15910 I 0.000
ONIVA07G00160 Oryza nivara ONIVA07G00160 I 0.000
OPUNC02G13150 Oryza punctata OPUNC02G13150 I 0.000
OPUNC03G32250 Oryza punctata OPUNC03G32250 I 0.000
OPUNC07G01230 Oryza punctata OPUNC07G01230 I 0.000
ORUFI02G14900 Oryza rufipogon ORUFI02G14900 I 0.000
ORUFI03G36670 Oryza rufipogon ORUFI03G36670 I 0.000
ORUFI07G01280 Oryza rufipogon ORUFI07G01280 I 0.000
NIGT1 Oryza sativa OS02G0325600 D 0.000
OS03G0764600 Oryza sativa OS03G0764600 I 0.000
OS07G0119300 Oryza sativa OS07G0119300 I 0.000
Pavir.Aa02952 Panicum virgatum Pavir.Aa02952 I 0.000
Pavir.Ia00346 Panicum virgatum Pavir.Ia00346 I 0.000
Pavir.J18103 Panicum virgatum Pavir.J18103 I 0.000
Pavir.Ab00626 Panicum virgatum Pavir.Ab00626 I 0.000
estExt_fgenesh1_pg.C_240109 Physcomitrella patens estExt_fgenesh1_pg.C_240109 I 0.000
fgenesh1_pg.scaffold_166000054 Physcomitrella patens fgenesh1_pg.scaffold_166000054 I 0.000
POPTR_0006s16000 Populus trichocarpa POPTR_0006s16000 I 0.000
POPTR_0018s06410 Populus trichocarpa POPTR_0018s06410 I 0.000
POPTR_0010s13900 Populus trichocarpa POPTR_0010s13900 I 0.000
POPTR_0009s10980 Populus trichocarpa POPTR_0009s10980 I 0.000
POPTR_0008s11630 Populus trichocarpa POPTR_0008s11630 I 0.000
POPTR_0007s11470 Populus trichocarpa POPTR_0007s11470 I 0.000
POPTR_0005s14120 Populus trichocarpa POPTR_0005s14120 I 0.000
POPTR_0004s15220 Populus trichocarpa POPTR_0004s15220 I 0.000
Pm021479 Prunus mume Pm021479 I 0.000
Pm026452 Prunus mume Pm026452 I 0.000
Pm027466 Prunus mume Pm027466 I 0.000
Pm029019 Prunus mume Pm029019 I 0.000
PRUPE_ppa007222mg Prunus persica PRUPE_ppa007222mg I 0.000
PRUPE_ppa006879mg Prunus persica PRUPE_ppa006879mg I 0.000
PRUPE_ppa006812mg Prunus persica PRUPE_ppa006812mg I 0.000
PRUPE_ppa016044mg Prunus persica PRUPE_ppa016044mg I 0.000
29676.m001636 Ricinus communis 29676.m001636 I 0.000
28883.m000751 Ricinus communis 28883.m000751 I 0.000
29780.m001324 Ricinus communis 29780.m001324 I 0.000
29807.m000474 Ricinus communis 29807.m000474 I 0.000
SapurV1A.1001s0050 Salix purpurea SapurV1A.1001s0050 I 0.000
SapurV1A.0090s0480 Salix purpurea SapurV1A.0090s0480 I 0.000
SapurV1A.1984s0010 Salix purpurea SapurV1A.1984s0010 I 0.000
SapurV1A.0246s0200 Salix purpurea SapurV1A.0246s0200 I 0.000
SapurV1A.0641s0120 Salix purpurea SapurV1A.0641s0120 I 0.000
SapurV1A.0512s0010 Salix purpurea SapurV1A.0512s0010 I 0.000
SapurV1A.1020s0030 Salix purpurea SapurV1A.1020s0030 I 0.000
SELMODRAFT_402040 Selaginella moellendorffii SELMODRAFT_402040 I 0.000
SELMODRAFT_66160 Selaginella moellendorffii SELMODRAFT_66160 I 0.000
SELMODRAFT_423260 Selaginella moellendorffii SELMODRAFT_423260 I 0.000
Si019945m.g Setaria italica Si019945m.g I 0.000
Si036412m.g Setaria italica Si036412m.g I 0.000
Solyc05g009720.2 Solanum lycopersicum Solyc05g009720.2 I 0.000
Solyc12g006800.1 Solanum lycopersicum Solyc12g006800.1 I 0.000
Solyc01g108300.2 Solanum lycopersicum Solyc01g108300.2 I 0.000
Solyc02g090400.2 Solanum lycopersicum Solyc02g090400.2 I 0.000
PGSC0003DMG400010067 Solanum tuberosum PGSC0003DMG400010067 I 0.000
PGSC0003DMG400025801 Solanum tuberosum PGSC0003DMG400025801 I 0.000
PGSC0003DMG400030389 Solanum tuberosum PGSC0003DMG400030389 I 0.000
PGSC0003DMG400000828 Solanum tuberosum PGSC0003DMG400000828 I 0.000
Sb01g007130 Sorghum bicolor Sb01g007130 I 0.000
Sb08g003180 Sorghum bicolor Sb08g003180 I 0.000
TCM_037970 Theobroma cacao TCM_037970 I 0.000
TCM_011857 Theobroma cacao TCM_011857 I 0.000
TCM_006998 Theobroma cacao TCM_006998 I 0.000
TCM_000558 Theobroma cacao TCM_000558 I 0.000
Traes_2BS_10A8CAB27 Triticum aestivum Traes_2BS_10A8CAB27 I 0.000
Traes_5BL_1AE458202 Triticum aestivum Traes_5BL_1AE458202 I 0.000
Traes_5DL_B2F166A31 Triticum aestivum Traes_5DL_B2F166A31 I 0.000
TRIUR3_20779 Triticum urartu TRIUR3_20779 I 0.000
VIT_11s0016g04600 Vitis vinifera VIT_11s0016g04600 I 0.000
VIT_07s0197g00060 Vitis vinifera VIT_07s0197g00060 I 0.000
VIT_01s0011g03110 Vitis vinifera VIT_01s0011g03110 I 0.000
VIT_03s0063g01060 Vitis vinifera VIT_03s0063g01060 I 0.000
GRMZM2G171468 Zea mays GRMZM2G171468 I 0.000
GRMZM2G159119 Zea mays GRMZM2G159119 I 0.000
GRMZM2G016370 Zea mays GRMZM2G016370 I 0.000