CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g123980
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo6g123980
T292439_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.966
0.991
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.966
0.991
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.936
0.851
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.923
0.833
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.923
0.833
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.917
0.825
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.910
0.851
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g123980.1
NAC/NAM
18
146
PPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQKTEWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
280 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_07581
Aegilops tauschii
F775_07581
I
0.000
F775_13221
Aegilops tauschii
F775_13221
I
0.000
F775_09486
Aegilops tauschii
F775_09486
I
0.000
AMTR_s00033p00241280
Amborella trichopoda
AMTR_s00033p00241280
I
0.000
AMTR_s00093p00110710
Amborella trichopoda
AMTR_s00093p00110710
I
0.000
AMTR_s00122p00127250
Amborella trichopoda
AMTR_s00122p00127250
I
0.000
Aquca_026_00236
Aquilegia coerulea
Aquca_026_00236
I
0.000
Aquca_010_00298
Aquilegia coerulea
Aquca_010_00298
I
0.000
Aquca_001_00694
Aquilegia coerulea
Aquca_001_00694
I
0.000
Al_scaffold_0001_2706
Arabidopsis lyrata
Al_scaffold_0001_2706
I
0.000
fgenesh2_kg.1__4045__AT1G49560.1
Arabidopsis lyrata
fgenesh2_kg.1__4045__AT1G49560.1
I
0.000
scaffold_500333.1
Arabidopsis lyrata
scaffold_500333.1
I
0.000
fgenesh2_kg.2__1124__AT1G68670.1
Arabidopsis lyrata
fgenesh2_kg.2__1124__AT1G68670.1
I
0.000
HHO2
Arabidopsis thaliana
AT1G68670
D
0.000
HHO1
Arabidopsis thaliana
AT3G25790
I
0.000
EFM
Arabidopsis thaliana
AT2G03500
D
0.000
HHO6
Arabidopsis thaliana
AT1G49560
D
0.000
HHO3
Arabidopsis thaliana
AT1G25550
D
0.000
Bostr.26675s0216
Boechera stricta
Bostr.26675s0216
I
0.000
Bostr.0556s0172
Boechera stricta
Bostr.0556s0172
I
0.000
Bostr.26959s0022
Boechera stricta
Bostr.26959s0022
I
0.000
Bostr.0556s0249
Boechera stricta
Bostr.0556s0249
I
0.000
Bostr.12659s0399
Boechera stricta
Bostr.12659s0399
I
0.000
BRADI1G07630
Brachypodium distachyon
BRADI1G07630
I
0.000
BRADI1G58830
Brachypodium distachyon
BRADI1G58830
I
0.000
BRADI3G10730
Brachypodium distachyon
BRADI3G10730
I
0.000
Bo6g107160
Brassica oleracea
Bo6g107160
I
0.000
Bo7g081380
Brassica oleracea
Bo7g081380
I
0.000
Bo2g061130
Brassica oleracea
Bo2g061130
I
0.000
Bo6g018370
Brassica oleracea
Bo6g018370
I
0.000
Bo7g082060
Brassica oleracea
Bo7g082060
I
0.000
Bo2g137000
Brassica oleracea
Bo2g137000
I
0.000
Bra004330
Brassica rapa
Bra004330
I
0.000
Bra018794
Brassica rapa
Bra018794
I
0.000
Bra025115
Brassica rapa
Bra025115
I
0.000
Bra026548
Brassica rapa
Bra026548
I
0.000
Bra038360
Brassica rapa
Bra038360
I
0.000
Bra040662
Brassica rapa
Bra040662
I
0.000
PK14402.1
Cannabis sativa
PK14402.1
D
0.000
PK19779.1
Cannabis sativa
PK19779.1
D
0.000
PK20621.1
Cannabis sativa
PK20621.1
I
0.000
PK04145.1
Cannabis sativa
PK04145.1
I
0.000
Cagra.3534s0002
Capsella grandiflora
Cagra.3534s0002
I
0.000
Cagra.3545s0007
Capsella grandiflora
Cagra.3545s0007
I
0.000
Cagra.3392s0001
Capsella grandiflora
Cagra.3392s0001
I
0.000
Cagra.0613s0015
Capsella grandiflora
Cagra.0613s0015
I
0.000
Cagra.0167s0004
Capsella grandiflora
Cagra.0167s0004
I
0.000
Carubv10009677m.g
Capsella rubella
Carubv10009677m.g
I
0.000
Carubv10017308m.g
Capsella rubella
Carubv10017308m.g
I
0.000
Carubv10018983m.g
Capsella rubella
Carubv10018983m.g
I
0.000
Carubv10020552m.g
Capsella rubella
Carubv10020552m.g
I
0.000
Carubv10009492m.g
Capsella rubella
Carubv10009492m.g
I
0.000
evm.TU.supercontig_6.397
Carica papaya
evm.TU.supercontig_6.397
I
0.000
evm.TU.supercontig_127.55
Carica papaya
evm.TU.supercontig_127.55
I
0.000
evm.TU.supercontig_1.213
Carica papaya
evm.TU.supercontig_1.213
I
0.000
evm.TU.supercontig_62.51
Carica papaya
evm.TU.supercontig_62.51
I
0.000
Ca_06422
Cicer arietinum
Ca_06422
I
0.000
Ca_02122
Cicer arietinum
Ca_02122
I
0.000
Ca_06627
Cicer arietinum
Ca_06627
I
0.000
Cla017007
Citrullus lanatus
Cla017007
I
0.000
Cla001846
Citrullus lanatus
Cla001846
I
0.000
Cla008104
Citrullus lanatus
Cla008104
I
0.000
Cla012503
Citrullus lanatus
Cla012503
I
0.000
Cla016244
Citrullus lanatus
Cla016244
I
0.000
Cla020676
Citrullus lanatus
Cla020676
I
0.000
Ciclev10008096m.g
Citrus clementina
Ciclev10008096m.g
I
0.000
Ciclev10031793m.g
Citrus clementina
Ciclev10031793m.g
I
0.000
Ciclev10028556m.g
Citrus clementina
Ciclev10028556m.g
I
0.000
orange1.1g011048m.g
Citrus sinensis
orange1.1g011048m.g
I
0.000
orange1.1g015403m.g
Citrus sinensis
orange1.1g015403m.g
I
0.000
orange1.1g016585m.g
Citrus sinensis
orange1.1g016585m.g
I
0.000
Cucsa.102260
Cucumis sativus
Cucsa.102260
I
0.000
Cucsa.365440
Cucumis sativus
Cucsa.365440
I
0.000
Cucsa.283860
Cucumis sativus
Cucsa.283860
I
0.000
Cucsa.220080
Cucumis sativus
Cucsa.220080
I
0.000
Cucsa.082250
Cucumis sativus
Cucsa.082250
I
0.000
Cucsa.116140
Cucumis sativus
Cucsa.116140
I
0.000
Cucsa.110080
Cucumis sativus
Cucsa.110080
I
0.000
Eucgr.I01178
Eucalyptus grandis
Eucgr.I01178
I
0.000
Eucgr.C04155
Eucalyptus grandis
Eucgr.C04155
I
0.000
Eucgr.G01503
Eucalyptus grandis
Eucgr.G01503
I
0.000
Eucgr.G02343
Eucalyptus grandis
Eucgr.G02343
I
0.000
Eucgr.H01993
Eucalyptus grandis
Eucgr.H01993
I
0.000
Thhalv10018737m.g
Eutrema salsugineum
Thhalv10018737m.g
I
0.000
Thhalv10011605m.g
Eutrema salsugineum
Thhalv10011605m.g
I
0.000
Thhalv10004475m.g
Eutrema salsugineum
Thhalv10004475m.g
I
0.000
Thhalv10004257m.g
Eutrema salsugineum
Thhalv10004257m.g
I
0.000
Thhalv10008115m.g
Eutrema salsugineum
Thhalv10008115m.g
I
0.000
gene31899-v1.0-hybrid
Fragaria vesca
gene31899-v1.0-hybrid
I
0.000
gene30953-v1.0-hybrid
Fragaria vesca
gene30953-v1.0-hybrid
I
0.000
gene24094-v1.0-hybrid
Fragaria vesca
gene24094-v1.0-hybrid
I
0.000
GLYMA01G39040
Glycine max
GLYMA01G39040
I
0.000
GLYMA07G33130
Glycine max
GLYMA07G33130
I
0.000
GLYMA06G23902
Glycine max
GLYMA06G23902
I
0.000
GLYMA05G08150
Glycine max
GLYMA05G08150
I
0.000
GLYMA04G21680
Glycine max
GLYMA04G21680
I
0.000
GLYMA02G15320
Glycine max
GLYMA02G15320
I
0.000
GLYMA10G34780
Glycine max
GLYMA10G34780
I
0.000
GLYMA11G06230
Glycine max
GLYMA11G06230
I
0.000
GLYMA17G12720
Glycine max
GLYMA17G12720
I
0.000
GLYMA17G20520
Glycine max
GLYMA17G20520
I
0.000
Gorai.008G026300
Gossypium raimondii
Gorai.008G026300
I
0.000
Gorai.013G080200
Gossypium raimondii
Gorai.013G080200
I
0.000
Gorai.013G040600
Gossypium raimondii
Gorai.013G040600
I
0.000
Gorai.012G150500
Gossypium raimondii
Gorai.012G150500
I
0.000
Gorai.009G022100
Gossypium raimondii
Gorai.009G022100
I
0.000
Gorai.008G185500
Gossypium raimondii
Gorai.008G185500
I
0.000
Gorai.008G073300
Gossypium raimondii
Gorai.008G073300
I
0.000
Gorai.001G002800
Gossypium raimondii
Gorai.001G002800
I
0.000
Gorai.003G021300
Gossypium raimondii
Gorai.003G021300
I
0.000
Gorai.007G053100
Gossypium raimondii
Gorai.007G053100
I
0.000
MLOC_72007
Hordeum vulgare
MLOC_72007
I
0.000
MLOC_67453
Hordeum vulgare
MLOC_67453
I
0.000
MLOC_61146
Hordeum vulgare
MLOC_61146
I
0.000
LPERR02G11880
Leersia perrieri
LPERR02G11880
I
0.000
Lus10021699.g
Linum usitatissimum
Lus10021699.g
I
0.000
Lus10012056.g
Linum usitatissimum
Lus10012056.g
I
0.000
Lus10043304.g
Linum usitatissimum
Lus10043304.g
I
0.000
Lus10041485.g
Linum usitatissimum
Lus10041485.g
I
0.000
Lus10035043.g
Linum usitatissimum
Lus10035043.g
I
0.000
Lus10034280.g
Linum usitatissimum
Lus10034280.g
I
0.000
chr2.LjT16G06.130.nd
Lotus japonicus
chr2.LjT16G06.130.nd
I
0.000
LjSGA_025851.1
Lotus japonicus
LjSGA_025851.1
I
0.000
MDP0000504079
Malus domestica
MDP0000504079
I
0.000
MDP0000128135
Malus domestica
MDP0000128135
I
0.000
MDP0000703817
Malus domestica
MDP0000703817
I
0.000
MDP0000265555
Malus domestica
MDP0000265555
I
0.000
MDP0000202657
Malus domestica
MDP0000202657
I
0.000
MDP0000200243
Malus domestica
MDP0000200243
I
0.000
cassava29869.valid.m1
Manihot esculenta
cassava29869.valid.m1
I
0.000
cassava11986.valid.m1
Manihot esculenta
cassava11986.valid.m1
I
0.000
cassava20352.m1
Manihot esculenta
cassava20352.m1
I
0.000
cassava24190.valid.m1
Manihot esculenta
cassava24190.valid.m1
I
0.000
cassava29454.valid.m1
Manihot esculenta
cassava29454.valid.m1
I
0.000
cassava43327.valid.m1
Manihot esculenta
cassava43327.valid.m1
I
0.000
cassava11434.m1
Manihot esculenta
cassava11434.m1
I
0.000
cassava11925.valid.m1
Manihot esculenta
cassava11925.valid.m1
I
0.000
MTR_4g113140
Medicago truncatula
MTR_4g113140
I
0.000
MTR_4g086835
Medicago truncatula
MTR_4g086835
I
0.000
MTR_5g017980
Medicago truncatula
MTR_5g017980
I
0.000
mgf023459m
Mimulus guttatus
mgf023459m
I
0.000
mgf006847m
Mimulus guttatus
mgf006847m
I
0.000
mgf007637m
Mimulus guttatus
mgf007637m
I
0.000
mgf011229m
Mimulus guttatus
mgf011229m
I
0.000
mgf013442m
Mimulus guttatus
mgf013442m
I
0.000
GSMUA_Achr11G13410_001
Musa acuminata
GSMUA_Achr11G13410_001
I
0.000
GSMUA_Achr6G05330_001
Musa acuminata
GSMUA_Achr6G05330_001
I
0.000
GSMUA_Achr3G21090_001
Musa acuminata
GSMUA_Achr3G21090_001
I
0.000
GSMUA_Achr10G27180_001
Musa acuminata
GSMUA_Achr10G27180_001
I
0.000
GSMUA_Achr10G08270_001
Musa acuminata
GSMUA_Achr10G08270_001
I
0.000
GSMUA_Achr6G34680_001
Musa acuminata
GSMUA_Achr6G34680_001
I
0.000
GSMUA_Achr9G09630_001
Musa acuminata
GSMUA_Achr9G09630_001
I
0.000
GSMUA_Achr9G26570_001
Musa acuminata
GSMUA_Achr9G26570_001
I
0.000
OBART03G35220
Oryza barthii
OBART03G35220
I
0.000
OBART07G01330
Oryza barthii
OBART07G01330
I
0.000
OBART02G14690
Oryza barthii
OBART02G14690
I
0.000
OB03G42230
Oryza brachyantha
OB03G42230
I
0.000
OB07G11040
Oryza brachyantha
OB07G11040
I
0.000
OB02G22950
Oryza brachyantha
OB02G22950
I
0.000
ORGLA10G0167800
Oryza glaberrima
ORGLA10G0167800
I
0.000
ORGLA01G0412400
Oryza glaberrima
ORGLA01G0412400
I
0.000
ORGLA02G0127400
Oryza glaberrima
ORGLA02G0127400
I
0.000
ORGLA03G0322500
Oryza glaberrima
ORGLA03G0322500
I
0.000
ORGLA07G0012100
Oryza glaberrima
ORGLA07G0012100
I
0.000
OGLUM02G14610
Oryza glumaepatula
OGLUM02G14610
I
0.000
BGIOSGA025055
Oryza indica
BGIOSGA025055
I
0.000
BGIOSGA013620
Oryza indica
BGIOSGA013620
I
0.000
OLONG_018167
Oryza longistaminata
OLONG_018167
I
0.000
OLONG_003720
Oryza longistaminata
OLONG_003720
I
0.000
OLONG_019215
Oryza longistaminata
OLONG_019215
I
0.000
OMERI02G14870
Oryza meridionalis
OMERI02G14870
I
0.000
ONIVA02G15910
Oryza nivara
ONIVA02G15910
I
0.000
ONIVA07G00160
Oryza nivara
ONIVA07G00160
I
0.000
OPUNC02G13150
Oryza punctata
OPUNC02G13150
I
0.000
OPUNC03G32250
Oryza punctata
OPUNC03G32250
I
0.000
OPUNC07G01230
Oryza punctata
OPUNC07G01230
I
0.000
ORUFI02G14900
Oryza rufipogon
ORUFI02G14900
I
0.000
ORUFI03G36670
Oryza rufipogon
ORUFI03G36670
I
0.000
ORUFI07G01280
Oryza rufipogon
ORUFI07G01280
I
0.000
NIGT1
Oryza sativa
OS02G0325600
D
0.000
OS03G0764600
Oryza sativa
OS03G0764600
I
0.000
OS07G0119300
Oryza sativa
OS07G0119300
I
0.000
Pavir.Aa02952
Panicum virgatum
Pavir.Aa02952
I
0.000
Pavir.Ia00346
Panicum virgatum
Pavir.Ia00346
I
0.000
Pavir.J18103
Panicum virgatum
Pavir.J18103
I
0.000
Pavir.Ab00626
Panicum virgatum
Pavir.Ab00626
I
0.000
estExt_fgenesh1_pg.C_240109
Physcomitrella patens
estExt_fgenesh1_pg.C_240109
I
0.000
fgenesh1_pg.scaffold_166000054
Physcomitrella patens
fgenesh1_pg.scaffold_166000054
I
0.000
POPTR_0006s16000
Populus trichocarpa
POPTR_0006s16000
I
0.000
POPTR_0018s06410
Populus trichocarpa
POPTR_0018s06410
I
0.000
POPTR_0010s13900
Populus trichocarpa
POPTR_0010s13900
I
0.000
POPTR_0009s10980
Populus trichocarpa
POPTR_0009s10980
I
0.000
POPTR_0008s11630
Populus trichocarpa
POPTR_0008s11630
I
0.000
POPTR_0007s11470
Populus trichocarpa
POPTR_0007s11470
I
0.000
POPTR_0005s14120
Populus trichocarpa
POPTR_0005s14120
I
0.000
POPTR_0004s15220
Populus trichocarpa
POPTR_0004s15220
I
0.000
Pm021479
Prunus mume
Pm021479
I
0.000
Pm026452
Prunus mume
Pm026452
I
0.000
Pm027466
Prunus mume
Pm027466
I
0.000
Pm029019
Prunus mume
Pm029019
I
0.000
PRUPE_ppa007222mg
Prunus persica
PRUPE_ppa007222mg
I
0.000
PRUPE_ppa006879mg
Prunus persica
PRUPE_ppa006879mg
I
0.000
PRUPE_ppa006812mg
Prunus persica
PRUPE_ppa006812mg
I
0.000
PRUPE_ppa016044mg
Prunus persica
PRUPE_ppa016044mg
I
0.000
29676.m001636
Ricinus communis
29676.m001636
I
0.000
28883.m000751
Ricinus communis
28883.m000751
I
0.000
29780.m001324
Ricinus communis
29780.m001324
I
0.000
29807.m000474
Ricinus communis
29807.m000474
I
0.000
SapurV1A.1001s0050
Salix purpurea
SapurV1A.1001s0050
I
0.000
SapurV1A.0090s0480
Salix purpurea
SapurV1A.0090s0480
I
0.000
SapurV1A.1984s0010
Salix purpurea
SapurV1A.1984s0010
I
0.000
SapurV1A.0246s0200
Salix purpurea
SapurV1A.0246s0200
I
0.000
SapurV1A.0641s0120
Salix purpurea
SapurV1A.0641s0120
I
0.000
SapurV1A.0512s0010
Salix purpurea
SapurV1A.0512s0010
I
0.000
SapurV1A.1020s0030
Salix purpurea
SapurV1A.1020s0030
I
0.000
SELMODRAFT_402040
Selaginella moellendorffii
SELMODRAFT_402040
I
0.000
SELMODRAFT_66160
Selaginella moellendorffii
SELMODRAFT_66160
I
0.000
SELMODRAFT_423260
Selaginella moellendorffii
SELMODRAFT_423260
I
0.000
Si019945m.g
Setaria italica
Si019945m.g
I
0.000
Si036412m.g
Setaria italica
Si036412m.g
I
0.000
Solyc05g009720.2
Solanum lycopersicum
Solyc05g009720.2
I
0.000
Solyc12g006800.1
Solanum lycopersicum
Solyc12g006800.1
I
0.000
Solyc01g108300.2
Solanum lycopersicum
Solyc01g108300.2
I
0.000
Solyc02g090400.2
Solanum lycopersicum
Solyc02g090400.2
I
0.000
PGSC0003DMG400010067
Solanum tuberosum
PGSC0003DMG400010067
I
0.000
PGSC0003DMG400025801
Solanum tuberosum
PGSC0003DMG400025801
I
0.000
PGSC0003DMG400030389
Solanum tuberosum
PGSC0003DMG400030389
I
0.000
PGSC0003DMG400000828
Solanum tuberosum
PGSC0003DMG400000828
I
0.000
Sb01g007130
Sorghum bicolor
Sb01g007130
I
0.000
Sb08g003180
Sorghum bicolor
Sb08g003180
I
0.000
TCM_037970
Theobroma cacao
TCM_037970
I
0.000
TCM_011857
Theobroma cacao
TCM_011857
I
0.000
TCM_006998
Theobroma cacao
TCM_006998
I
0.000
TCM_000558
Theobroma cacao
TCM_000558
I
0.000
Traes_2BS_10A8CAB27
Triticum aestivum
Traes_2BS_10A8CAB27
I
0.000
Traes_5BL_1AE458202
Triticum aestivum
Traes_5BL_1AE458202
I
0.000
Traes_5DL_B2F166A31
Triticum aestivum
Traes_5DL_B2F166A31
I
0.000
TRIUR3_20779
Triticum urartu
TRIUR3_20779
I
0.000
VIT_11s0016g04600
Vitis vinifera
VIT_11s0016g04600
I
0.000
VIT_07s0197g00060
Vitis vinifera
VIT_07s0197g00060
I
0.000
VIT_01s0011g03110
Vitis vinifera
VIT_01s0011g03110
I
0.000
VIT_03s0063g01060
Vitis vinifera
VIT_03s0063g01060
I
0.000
GRMZM2G171468
Zea mays
GRMZM2G171468
I
0.000
GRMZM2G159119
Zea mays
GRMZM2G159119
I
0.000
GRMZM2G016370
Zea mays
GRMZM2G016370
I
0.000