CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla011239
(
Citrullus lanatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cla011239
T296558_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla011239
NAC/NAM
23
148
FPGFRFSPTDEELISFYLKKKLEGYEKSVEVIAEIEIYKYEPWDLPAKSIIQSENEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKSGSNTIGTKRTLVFHTGRAPKGERTEWIMHEYNT
Links
Other
NAC/NAM
family TFs
Other
Citrullus lanatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g086880
Medicago truncatula
MTR_2g086880
N
0.922
PK07042.1
Cannabis sativa
PK07042.1
N
0.921
GLYMA13G39090
Glycine max
GLYMA13G39090
N
0.919
Ca_07077
Cicer arietinum
Ca_07077
N
0.915
MDP0000133636
Malus domestica
MDP0000133636
N
0.905
mgf010463m
Mimulus guttatus
mgf010463m
N
0.904
Cla008773
Citrullus lanatus
Cla008773
N
0.896
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.893
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.891
Cucsa.185800
Cucumis sativus
Cucsa.185800
N
0.891
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.884
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.884
LjT33C23.90.nd
Lotus japonicus
LjT33C23.90.nd
N
0.881