CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.259.32.1
(
Physcomitrella patens
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
e_gw1.259.32.1
T297036_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.279.28.1
M02380_2.00
Physcomitrella patens
NNNTTGHKTDY
RHAMDCAANNN
PBM
Weirauch et al.(2014)
pTH8466
0.939
0.825
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.259.32.1
NAC/NAM
12
138
PPGFRFHPTDDELVSFYLTRKVKNPHFAVKSIPNVSLNKCEPWDLPEKAKVGEKEWYFFSLRDRKYPTGIRTNRATEKGYWKATGKDRDVMNYSTHLLVGMKKTLVFYLGRAPKGAKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Physcomitrella patens
TFs
172 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy