Bostr.4825s0021 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.4825s0021 T297315_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY

RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.952 0.723
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN

NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.952 0.723
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.896 0.625
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.4825s0021.1.p NAC/NAM 5 132

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.896
anac067 Arabidopsis thaliana AT4G01520 I 0.948
NAC68 Arabidopsis thaliana AT4G01540 D 0.952
NAC69 Arabidopsis thaliana AT4G01550 D 0.896
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.908
Bostr.4825s0024 Boechera stricta Bostr.4825s0024 N 0.972
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.970
Bo9g004110 Brassica oleracea Bo9g004110 I 0.882
Bo9g061230 Brassica oleracea Bo9g061230 I 0.876
Bo9g004090 Brassica oleracea Bo9g004090 I 0.920
Bo6g119080 Brassica oleracea Bo6g119080 I 0.920
Bo00853s060 Brassica oleracea Bo00853s060 I 0.922
Bo9g004100 Brassica oleracea Bo9g004100 I 0.885
Bra036327 Brassica rapa Bra036327 I 0.914
Bra008553 Brassica rapa Bra008553 I 0.897
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.949
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.969
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.926
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.890