CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.I00100
(
Eucalyptus grandis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Eucgr.I00100
T297770_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.924
0.781
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.924
0.781
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.924
0.781
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.922
0.789
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.I00100.1
NAC/NAM
9
132
PAGFRFHPTDDELVNDYLIRKCASHAISVPFIAEIDLYKFDPWVLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKTLGIKKALVFYAGKAPRGVKTNWIMHEYRL
Eucgr.I00100.2
NAC/NAM
4
89
DGVWVGIAEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKTLGIKKALVFYAGKAPRGVKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Eucalyptus grandis
TFs
256 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.I00059
Eucalyptus grandis
Eucgr.I00059
I
0.981
Eucgr.I00099
Eucalyptus grandis
Eucgr.I00099
I
0.976
Eucgr.I00060
Eucalyptus grandis
Eucgr.I00060
I
0.970
Gorai.012G037600
Gossypium raimondii
Gorai.012G037600
I
0.969
cassava5772.m1
Manihot esculenta
cassava5772.m1
I
0.968
Eucgr.I00101
Eucalyptus grandis
Eucgr.I00101
I
0.967
TCM_001595
Theobroma cacao
TCM_001595
I
0.966
30193.m000709
Ricinus communis
30193.m000709
I
0.964
Eucgr.H05089
Eucalyptus grandis
Eucgr.H05089
I
0.964
evm.TU.supercontig_64.115
Carica papaya
evm.TU.supercontig_64.115
I
0.963
Lus10020883.g
Linum usitatissimum
Lus10020883.g
I
0.963
chr4.LjT06B21.210.nd
Lotus japonicus
chr4.LjT06B21.210.nd
I
0.963
Lus10033493.g
Linum usitatissimum
Lus10033493.g
I
0.963
Cucsa.125330
Cucumis sativus
Cucsa.125330
I
0.962
Cla023536
Citrullus lanatus
Cla023536
I
0.961
Eucgr.I00056
Eucalyptus grandis
Eucgr.I00056
I
0.958
Bra028645
Brassica rapa
Bra028645
I
0.958
Bo9g174170
Brassica oleracea
Bo9g174170
I
0.958
Bostr.13129s0073
Boechera stricta
Bostr.13129s0073
I
0.958
Eucgr.I00058
Eucalyptus grandis
Eucgr.I00058
I
0.958
Bo02109s010
Brassica oleracea
Bo02109s010
I
0.958
Bo2g009250
Brassica oleracea
Bo2g009250
I
0.958
NAC081
Arabidopsis thaliana
AT5G08790
I
0.958
Lus10025690.g
Linum usitatissimum
Lus10025690.g
I
0.957
VIT_07s0031g02610
Vitis vinifera
VIT_07s0031g02610
I
0.957
Eucgr.I00057
Eucalyptus grandis
Eucgr.I00057
I
0.956
PGSC0003DMG400032555
Solanum tuberosum
PGSC0003DMG400032555
I
0.956
POPTR_0005s20240
Populus trichocarpa
POPTR_0005s20240
I
0.956
Thhalv10014325m.g
Eutrema salsugineum
Thhalv10014325m.g
I
0.956
ATAF2
Arabidopsis lyrata
scaffold_600916.1
I
0.956
Eucgr.I00095
Eucalyptus grandis
Eucgr.I00095
I
0.955
Ca_16946
Cicer arietinum
Ca_16946
I
0.955
Bra009370
Brassica rapa
Bra009370
I
0.954
evm.TU.supercontig_37.28
Carica papaya
evm.TU.supercontig_37.28
I
0.954
Bo3g005100
Brassica oleracea
Bo3g005100
I
0.954
PGSC0003DMG400009245
Solanum tuberosum
PGSC0003DMG400009245
I
0.954
Lus10018142.g
Linum usitatissimum
Lus10018142.g
I
0.954
Bra006015
Brassica rapa
Bra006015
I
0.954
Solyc06g060230.2
Solanum lycopersicum
Solyc06g060230.2
I
0.953
POPTR_0002s08150
Populus trichocarpa
POPTR_0002s08150
I
0.953
Ciclev10001976m.g
Citrus clementina
Ciclev10001976m.g
I
0.953
Cagra.0248s0059
Capsella grandiflora
Cagra.0248s0059
I
0.952
Carubv10026953m.g
Capsella rubella
Carubv10026953m.g
I
0.952
ANAC102
Arabidopsis thaliana
AT5G63790
I
0.952
GLYMA02G26480
Glycine max
GLYMA02G26480
I
0.952
mgf015596m
Mimulus guttatus
mgf015596m
I
0.952
Bostr.0568s0429
Boechera stricta
Bostr.0568s0429
I
0.952
Thhalv10004786m.g
Eutrema salsugineum
Thhalv10004786m.g
I
0.952
Cla014135
Citrullus lanatus
Cla014135
I
0.951
ANAC102
Arabidopsis lyrata
Al_scaffold_0008_2913
I
0.951
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.951
29648.m002012
Ricinus communis
29648.m002012
I
0.951
Cucsa.060600
Cucumis sativus
Cucsa.060600
I
0.951
Bo2g165880
Brassica oleracea
Bo2g165880
I
0.950
PRUPE_ppa009380mg
Prunus persica
PRUPE_ppa009380mg
I
0.950
Pm004758
Prunus mume
Pm004758
I
0.950
gene11226-v1.0-hybrid
Fragaria vesca
gene11226-v1.0-hybrid
I
0.950
Bra038663
Brassica rapa
Bra038663
I
0.950
Cucsa.228100
Cucumis sativus
Cucsa.228100
I
0.949
Thhalv10008371m.g
Eutrema salsugineum
Thhalv10008371m.g
I
0.949
Carubv10003254m.g
Capsella rubella
Carubv10003254m.g
I
0.948
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.948
Cagra.1365s0094
Capsella grandiflora
Cagra.1365s0094
I
0.948
Bostr.20129s0180
Boechera stricta
Bostr.20129s0180
I
0.948
OLONG_000792
Oryza longistaminata
OLONG_000792
I
0.947
OBART11G05220
Oryza barthii
OBART11G05220
I
0.947
OMERI11G04290
Oryza meridionalis
OMERI11G04290
I
0.947
OGLUM11G05010
Oryza glumaepatula
OGLUM11G05010
I
0.947
ORGLA11G0050000
Oryza glaberrima
ORGLA11G0050000
I
0.947
NAC71
Oryza sativa
OS11G0184900
I
0.947
ORUFI11G05080
Oryza rufipogon
ORUFI11G05080
I
0.947
ONIVA11G05560
Oryza nivara
ONIVA11G05560
I
0.947
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.947
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.947
BGIOSGA034376
Oryza indica
BGIOSGA034376
I
0.947
Bra008309
Brassica rapa
Bra008309
I
0.947
BGIOSGA034377
Oryza indica
BGIOSGA034377
I
0.947
Carubv10020834m.g
Capsella rubella
Carubv10020834m.g
I
0.946
LPERR11G04670
Leersia perrieri
LPERR11G04670
I
0.946
OPUNC11G05010
Oryza punctata
OPUNC11G05010
I
0.946
anac032
Arabidopsis lyrata
scaffold_202708.1
I
0.946
Bra029201
Brassica rapa
Bra029201
I
0.946
Cagra.0096s0087
Capsella grandiflora
Cagra.0096s0087
I
0.946
NAC032
Arabidopsis thaliana
AT1G77450
I
0.946
Thhalv10018998m.g
Eutrema salsugineum
Thhalv10018998m.g
I
0.946
MLOC_63743
Hordeum vulgare
MLOC_63743
I
0.945
Si026342m.g
Setaria italica
Si026342m.g
I
0.945
Si022381m.g
Setaria italica
Si022381m.g
I
0.944
Sb09g020750
Sorghum bicolor
Sb09g020750
I
0.944
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.943
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.943
Pavir.J34979
Panicum virgatum
Pavir.J34979
I
0.942
PGSC0003DMG400017567
Solanum tuberosum
PGSC0003DMG400017567
I
0.942
Bo2g092550
Brassica oleracea
Bo2g092550
I
0.941
GRMZM2G123667
Zea mays
GRMZM2G123667
I
0.941
GRMZM2G180328
Zea mays
GRMZM2G180328
I
0.939
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.939
AMTR_s00009p00259320
Amborella trichopoda
AMTR_s00009p00259320
I
0.938
Sb05g005450
Sorghum bicolor
Sb05g005450
I
0.938
MTR_3g088110
Medicago truncatula
MTR_3g088110
I
0.937
Ca_04233
Cicer arietinum
Ca_04233
I
0.937
Ciclev10001956m.g
Citrus clementina
Ciclev10001956m.g
I
0.937
orange1.1g021910m.g
Citrus sinensis
orange1.1g021910m.g
I
0.937
MTR_3g096920
Medicago truncatula
MTR_3g096920
I
0.937
Pavir.J30396
Panicum virgatum
Pavir.J30396
I
0.936
PK25206.1
Cannabis sativa
PK25206.1
I
0.936
GLYMA04G38560
Glycine max
GLYMA04G38560
I
0.936
OB11G14310
Oryza brachyantha
OB11G14310
I
0.936
Ca_12660
Cicer arietinum
Ca_12660
I
0.935
PK26157.1
Cannabis sativa
PK26157.1
I
0.935
GLYMA06G11970
Glycine max
GLYMA06G11970
I
0.935
BRADI2G24987
Brachypodium distachyon
BRADI2G24987
I
0.934
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.934
LPERR03G32860
Leersia perrieri
LPERR03G32860
I
0.933
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.933
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.933
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.932
LjT04N09.140.nd
Lotus japonicus
LjT04N09.140.nd
I
0.932
OLONG_018385
Oryza longistaminata
OLONG_018385
I
0.931
GRMZM2G336533
Zea mays
GRMZM2G336533
I
0.931
GRMZM2G018553
Zea mays
GRMZM2G018553
I
0.931
GRMZM2G347043
Zea mays
GRMZM2G347043
I
0.931
Si036695m.g
Setaria italica
Si036695m.g
I
0.931
OS03G0815100
Oryza sativa
OS03G0815100
I
0.931
BGIOSGA013814
Oryza indica
BGIOSGA013814
I
0.931
OPUNC03G35740
Oryza punctata
OPUNC03G35740
I
0.931
OMERI03G35600
Oryza meridionalis
OMERI03G35600
I
0.931
ONIVA03G40320
Oryza nivara
ONIVA03G40320
I
0.931
OB03G45600
Oryza brachyantha
OB03G45600
I
0.931
OBART03G38670
Oryza barthii
OBART03G38670
I
0.931
ORGLA03G0354300
Oryza glaberrima
ORGLA03G0354300
I
0.931
ORUFI03G40310
Oryza rufipogon
ORUFI03G40310
I
0.931
OGLUM03G38490
Oryza glumaepatula
OGLUM03G38490
I
0.931
Pavir.J04666
Panicum virgatum
Pavir.J04666
I
0.931
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.930
Sb01g003710
Sorghum bicolor
Sb01g003710
I
0.929
MLOC_37104
Hordeum vulgare
MLOC_37104
I
0.928
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.928
TCM_035160
Theobroma cacao
TCM_035160
I
0.928
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.928
gene24179-v1.0-hybrid
Fragaria vesca
gene24179-v1.0-hybrid
I
0.928
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.928
Traes_5BL_4497A137C
Triticum aestivum
Traes_5BL_4497A137C
I
0.928
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.927
BRADI1G04150
Brachypodium distachyon
BRADI1G04150
I
0.926
TRAES3BF094400050CFD_g
Triticum aestivum
TRAES3BF094400050CFD_g
N
0.926
GSMUA_Achr6G25380_001
Musa acuminata
GSMUA_Achr6G25380_001
I
0.926
Pavir.Ia00158
Panicum virgatum
Pavir.Ia00158
I
0.926
MLOC_70929
Hordeum vulgare
MLOC_70929
N
0.926
Bra033239
Brassica rapa
Bra033239
I
0.924
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.924
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.924
GLYMA04G42800
Glycine max
GLYMA04G42800
I
0.924
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.924
NAC002
Arabidopsis thaliana
AT1G01720
D
0.924
Si002413m.g
Setaria italica
Si002413m.g
I
0.923
Lus10042731.g
Linum usitatissimum
Lus10042731.g
I
0.923
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.923
Pm012630
Prunus mume
Pm012630
I
0.923
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.923
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.922
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.922
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.922
PRUPE_ppa009438mg
Prunus persica
PRUPE_ppa009438mg
I
0.922
NAC48
Oryza sativa
OS01G0884300
D
0.922
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.922
Eucgr.F04341
Eucalyptus grandis
Eucgr.F04341
I
0.922
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.922
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.922
OB01G48340
Oryza brachyantha
OB01G48340
I
0.922
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.922
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.922
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.922
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.922
OBART01G39590
Oryza barthii
OBART01G39590
I
0.922
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.921
mgf002183m
Mimulus guttatus
mgf002183m
I
0.921
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.921
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.919
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.919
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.919
F775_28813
Aegilops tauschii
F775_28813
I
0.919
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.918
mgf004020m
Mimulus guttatus
mgf004020m
I
0.918
GSMUA_Achr10G04570_001
Musa acuminata
GSMUA_Achr10G04570_001
I
0.916
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.915
SELMODRAFT_108667
Selaginella moellendorffii
SELMODRAFT_108667
I
0.914
SELMODRAFT_147012
Selaginella moellendorffii
SELMODRAFT_147012
I
0.914
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.913
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.913
GSMUA_Achr3G18990_001
Musa acuminata
GSMUA_Achr3G18990_001
I
0.913
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.913
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.913
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.911
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.911
OB05G24820
Oryza brachyantha
OB05G24820
I
0.911
F775_52139
Aegilops tauschii
F775_52139
N
0.910
Pavir.Ha00897
Panicum virgatum
Pavir.Ha00897
I
0.908
GSMUA_Achr6G17720_001
Musa acuminata
GSMUA_Achr6G17720_001
I
0.907
GSMUA_Achr6G32330_001
Musa acuminata
GSMUA_Achr6G32330_001
I
0.903
OPUNC01G34000
Oryza punctata
OPUNC01G34000
I
0.901
MTR_7g100990
Medicago truncatula
MTR_7g100990
I
0.901
GLYMA06G16440
Glycine max
GLYMA06G16440
I
0.900
GLYMA05G15533
Glycine max
GLYMA05G15533
I
0.897
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.897
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.896
chr1.CM0033.600.nc
Lotus japonicus
chr1.CM0033.600.nc
I
0.895
GSMUA_Achr10G29200_001
Musa acuminata
GSMUA_Achr10G29200_001
I
0.895
BRADI2G53260
Brachypodium distachyon
BRADI2G53260
I
0.895
GSMUA_Achr5G07590_001
Musa acuminata
GSMUA_Achr5G07590_001
I
0.894
VIT_06s0004g03080
Vitis vinifera
VIT_06s0004g03080
I
0.894
Ca_12031
Cicer arietinum
Ca_12031
I
0.894
Lus10007410.g
Linum usitatissimum
Lus10007410.g
I
0.892
Traes_4AL_BF13412D4
Triticum aestivum
Traes_4AL_BF13412D4
I
0.892
TRIUR3_12483
Triticum urartu
TRIUR3_12483
I
0.892
GLYMA03G33690
Glycine max
GLYMA03G33690
I
0.892
Traes_4DS_DA83A5E27
Triticum aestivum
Traes_4DS_DA83A5E27
I
0.892
Pavir.Eb03542
Panicum virgatum
Pavir.Eb03542
I
0.892
Pavir.Ea03233
Panicum virgatum
Pavir.Ea03233
I
0.892
GLYMA12G21272
Glycine max
GLYMA12G21272
I
0.891
Aquca_014_00941
Aquilegia coerulea
Aquca_014_00941
I
0.891
BRADI4G23640
Brachypodium distachyon
BRADI4G23640
I
0.891
Lus10036117.g
Linum usitatissimum
Lus10036117.g
I
0.890
GRMZM2G068973
Zea mays
GRMZM2G068973
I
0.890
Sb03g037940
Sorghum bicolor
Sb03g037940
I
0.890
BRADI1G53770
Brachypodium distachyon
BRADI1G53770
I
0.890
MLOC_61270
Hordeum vulgare
MLOC_61270
I
0.887
OPUNC07G07310
Oryza punctata
OPUNC07G07310
I
0.886
LPERR01G30200
Leersia perrieri
LPERR01G30200
I
0.885
OMERI01G32290
Oryza meridionalis
OMERI01G32290
I
0.885
OB01G43840
Oryza brachyantha
OB01G43840
I
0.885
ORUFI01G38320
Oryza rufipogon
ORUFI01G38320
I
0.885
ONIVA01G39980
Oryza nivara
ONIVA01G39980
I
0.885
ORGLA01G0288400
Oryza glaberrima
ORGLA01G0288400
I
0.885
NAC68
Oryza sativa
OS01G0816100
I
0.885
SELMODRAFT_133982
Selaginella moellendorffii
SELMODRAFT_133982
I
0.885
BGIOSGA000598
Oryza indica
BGIOSGA000598
I
0.885
OBART01G35010
Oryza barthii
OBART01G35010
I
0.885
OGLUM01G39020
Oryza glumaepatula
OGLUM01G39020
I
0.885
SELMODRAFT_47266
Selaginella moellendorffii
SELMODRAFT_47266
I
0.885
Thhalv10012308m.g
Eutrema salsugineum
Thhalv10012308m.g
I
0.882
mgf013201m
Mimulus guttatus
mgf013201m
I
0.882
Lus10029692.g
Linum usitatissimum
Lus10029692.g
N
0.882
Si002386m.g
Setaria italica
Si002386m.g
N
0.881
cassava3577.m1
Manihot esculenta
cassava3577.m1
I
0.879
chr3.CM0111.130.nd
Lotus japonicus
chr3.CM0111.130.nd
I
0.878
TCM_041055
Theobroma cacao
TCM_041055
I
0.877
SELMODRAFT_125697
Selaginella moellendorffii
SELMODRAFT_125697
I
0.876
GLYMA13G40251
Glycine max
GLYMA13G40251
I
0.876
SELMODRAFT_105213
Selaginella moellendorffii
SELMODRAFT_105213
I
0.876
gene04766-v1.0-hybrid
Fragaria vesca
gene04766-v1.0-hybrid
I
0.873
e_gw1.259.28.1
Physcomitrella patens
e_gw1.259.28.1
I
0.872
Bo6g030920
Brassica oleracea
Bo6g030920
I
0.871
OB07G15670
Oryza brachyantha
OB07G15670
I
0.871
Bra018997
Brassica rapa
Bra018997
I
0.871
Eucgr.I00102
Eucalyptus grandis
Eucgr.I00102
N
0.346