gene24179-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene24179-v1.0-hybrid T297986_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.895 0.781
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.895 0.781
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.895 0.781
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.893 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna24179.1-v1.0-hybrid NAC/NAM 8 131

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa009438mg Prunus persica PRUPE_ppa009438mg I 0.975
Pm012630 Prunus mume Pm012630 I 0.974
Ca_16946 Cicer arietinum Ca_16946 I 0.955
Solyc06g060230.2 Solanum lycopersicum Solyc06g060230.2 I 0.948
PGSC0003DMG400009245 Solanum tuberosum PGSC0003DMG400009245 I 0.947
VIT_07s0031g02610 Vitis vinifera VIT_07s0031g02610 I 0.947
Bo9g174170 Brassica oleracea Bo9g174170 I 0.946
Ciclev10001976m.g Citrus clementina Ciclev10001976m.g I 0.946
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.946
Bo2g009250 Brassica oleracea Bo2g009250 I 0.946
Bostr.13129s0073 Boechera stricta Bostr.13129s0073 I 0.946
Bra028645 Brassica rapa Bra028645 I 0.946
NAC081 Arabidopsis thaliana AT5G08790 I 0.946
Bo02109s010 Brassica oleracea Bo02109s010 I 0.946
chr4.LjT06B21.210.nd Lotus japonicus chr4.LjT06B21.210.nd I 0.944
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I 0.944
GLYMA02G26480 Glycine max GLYMA02G26480 I 0.944
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I 0.944
Cucsa.228100 Cucumis sativus Cucsa.228100 I 0.943
Thhalv10014325m.g Eutrema salsugineum Thhalv10014325m.g I 0.943
ATAF2 Arabidopsis lyrata scaffold_600916.1 I 0.943
29648.m002012 Ricinus communis 29648.m002012 I 0.943
Eucgr.I00057 Eucalyptus grandis Eucgr.I00057 I 0.942
Thhalv10008371m.g Eutrema salsugineum Thhalv10008371m.g I 0.942
POPTR_0002s08150 Populus trichocarpa POPTR_0002s08150 I 0.942
Lus10033493.g Linum usitatissimum Lus10033493.g I 0.941
Cla014135 Citrullus lanatus Cla014135 I 0.941
Ca_04233 Cicer arietinum Ca_04233 I 0.941
Cucsa.060600 Cucumis sativus Cucsa.060600 I 0.941
gene11226-v1.0-hybrid Fragaria vesca gene11226-v1.0-hybrid I 0.941
Bra009370 Brassica rapa Bra009370 I 0.941
Bra006015 Brassica rapa Bra006015 I 0.941
Eucgr.I00060 Eucalyptus grandis Eucgr.I00060 I 0.941
cassava5772.m1 Manihot esculenta cassava5772.m1 I 0.941
Gorai.012G037600 Gossypium raimondii Gorai.012G037600 I 0.941
Lus10020883.g Linum usitatissimum Lus10020883.g I 0.941
Pm004758 Prunus mume Pm004758 I 0.940
Eucgr.I00095 Eucalyptus grandis Eucgr.I00095 I 0.940
PRUPE_ppa009380mg Prunus persica PRUPE_ppa009380mg I 0.940
Thhalv10018998m.g Eutrema salsugineum Thhalv10018998m.g I 0.940
Cagra.0096s0087 Capsella grandiflora Cagra.0096s0087 I 0.940
Carubv10020834m.g Capsella rubella Carubv10020834m.g I 0.940
anac032 Arabidopsis lyrata scaffold_202708.1 I 0.940
Bra008309 Brassica rapa Bra008309 I 0.940
GLYMA04G38560 Glycine max GLYMA04G38560 I 0.940
NAC032 Arabidopsis thaliana AT1G77450 I 0.940
Bo3g005100 Brassica oleracea Bo3g005100 I 0.940
Cagra.0248s0059 Capsella grandiflora Cagra.0248s0059 I 0.939
Bostr.20129s0180 Boechera stricta Bostr.20129s0180 I 0.939
GLYMA06G16440 Glycine max GLYMA06G16440 I 0.939
TCM_001595 Theobroma cacao TCM_001595 I 0.939
Carubv10026953m.g Capsella rubella Carubv10026953m.g I 0.939
Eucgr.H05089 Eucalyptus grandis Eucgr.H05089 I 0.939
Thhalv10004786m.g Eutrema salsugineum Thhalv10004786m.g I 0.939
30193.m000709 Ricinus communis 30193.m000709 I 0.938
Bostr.0568s0429 Boechera stricta Bostr.0568s0429 I 0.938
ANAC102 Arabidopsis thaliana AT5G63790 I 0.938
MTR_3g096920 Medicago truncatula MTR_3g096920 I 0.938
ANAC102 Arabidopsis lyrata Al_scaffold_0008_2913 I 0.937
Cucsa.125330 Cucumis sativus Cucsa.125330 I 0.935
evm.TU.supercontig_64.115 Carica papaya evm.TU.supercontig_64.115 I 0.934
Bo2g165880 Brassica oleracea Bo2g165880 I 0.934
Bo2g092550 Brassica oleracea Bo2g092550 I 0.934
MLOC_63743 Hordeum vulgare MLOC_63743 I 0.933
AMTR_s00009p00259320 Amborella trichopoda AMTR_s00009p00259320 I 0.933
Bra038663 Brassica rapa Bra038663 I 0.933
PGSC0003DMG400017567 Solanum tuberosum PGSC0003DMG400017567 I 0.933
Eucgr.I00101 Eucalyptus grandis Eucgr.I00101 I 0.933
Sb09g020750 Sorghum bicolor Sb09g020750 I 0.932
Carubv10003254m.g Capsella rubella Carubv10003254m.g I 0.932
Cagra.1365s0094 Capsella grandiflora Cagra.1365s0094 I 0.932
Cla023536 Citrullus lanatus Cla023536 I 0.931
Si022381m.g Setaria italica Si022381m.g I 0.929
Pavir.J34979 Panicum virgatum Pavir.J34979 I 0.929
MTR_3g088110 Medicago truncatula MTR_3g088110 I 0.928
Eucgr.I00100 Eucalyptus grandis Eucgr.I00100 I 0.928
Eucgr.I00059 Eucalyptus grandis Eucgr.I00059 I 0.928
Bra029201 Brassica rapa Bra029201 I 0.928
GRMZM2G180328 Zea mays GRMZM2G180328 I 0.926
mgf015596m Mimulus guttatus mgf015596m I 0.926
PK25206.1 Cannabis sativa PK25206.1 I 0.926
Ca_12660 Cicer arietinum Ca_12660 I 0.925
GLYMA06G11970 Glycine max GLYMA06G11970 I 0.925
Lus10025690.g Linum usitatissimum Lus10025690.g I 0.923
PGSC0003DMG400032555 Solanum tuberosum PGSC0003DMG400032555 I 0.923
PK26157.1 Cannabis sativa PK26157.1 I 0.923
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I 0.922
Pavir.J30396 Panicum virgatum Pavir.J30396 I 0.921
orange1.1g021910m.g Citrus sinensis orange1.1g021910m.g I 0.918
Lus10018142.g Linum usitatissimum Lus10018142.g I 0.918
Ciclev10001956m.g Citrus clementina Ciclev10001956m.g I 0.918
Lus10042731.g Linum usitatissimum Lus10042731.g I 0.917
evm.TU.supercontig_37.28 Carica papaya evm.TU.supercontig_37.28 I 0.916
BRADI2G24987 Brachypodium distachyon BRADI2G24987 I 0.915
anac032 Vitis vinifera VIT_18s0001g02300 I 0.914
gene09702-v1.0-hybrid Fragaria vesca gene09702-v1.0-hybrid N 0.910
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.910
Eucgr.I00099 Eucalyptus grandis Eucgr.I00099 I 0.909
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.909
Eucgr.F04341 Eucalyptus grandis Eucgr.F04341 I 0.908
GLYMA04G42800 Glycine max GLYMA04G42800 I 0.906
GSMUA_Achr6G25380_001 Musa acuminata GSMUA_Achr6G25380_001 I 0.906
NAC71 Oryza sativa OS11G0184900 I 0.904
BGIOSGA034376 Oryza indica BGIOSGA034376 I 0.904
OLONG_000792 Oryza longistaminata OLONG_000792 I 0.904
BGIOSGA034377 Oryza indica BGIOSGA034377 I 0.904
OMERI11G04290 Oryza meridionalis OMERI11G04290 I 0.904
ORUFI11G05080 Oryza rufipogon ORUFI11G05080 I 0.904
ORGLA11G0050000 Oryza glaberrima ORGLA11G0050000 I 0.904
ONIVA11G05560 Oryza nivara ONIVA11G05560 I 0.904
OBART11G05220 Oryza barthii OBART11G05220 I 0.904
OGLUM11G05010 Oryza glumaepatula OGLUM11G05010 I 0.904
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.903
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.903
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.902
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.901
GSMUA_Achr3G18990_001 Musa acuminata GSMUA_Achr3G18990_001 I 0.901
TCM_035160 Theobroma cacao TCM_035160 I 0.901
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.901
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.901
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.901
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.900
OPUNC11G05010 Oryza punctata OPUNC11G05010 I 0.899
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.899
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.899
LPERR11G04670 Leersia perrieri LPERR11G04670 I 0.899
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I 0.898
Si026342m.g Setaria italica Si026342m.g I 0.897
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.896
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.895
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.895
NAC002 Arabidopsis thaliana AT1G01720 D 0.895
Bo5g001100 Brassica oleracea Bo5g001100 I 0.895
Bra033239 Brassica rapa Bra033239 I 0.895
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.895
Si002413m.g Setaria italica Si002413m.g I 0.894
F775_28813 Aegilops tauschii F775_28813 I 0.894
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.894
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.894
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.894
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.893
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.893
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.893
PRUPE_ppa015363mg Prunus persica PRUPE_ppa015363mg N 0.893
NAC48 Oryza sativa OS01G0884300 D 0.893
Pm030099 Prunus mume Pm030099 N 0.893
OBART01G39590 Oryza barthii OBART01G39590 I 0.893
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.893
mgf002183m Mimulus guttatus mgf002183m I 0.893
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.893
OB01G48340 Oryza brachyantha OB01G48340 I 0.893
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.893
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.893
MDP0000802924 Malus domestica MDP0000802924 N 0.893
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.893
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.892
GRMZM2G123667 Zea mays GRMZM2G123667 I 0.892
Pavir.J04049 Panicum virgatum Pavir.J04049 I 0.892
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.892
GSMUA_Achr5G07590_001 Musa acuminata GSMUA_Achr5G07590_001 I 0.890
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.889
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.889
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.888
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.888
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.888
Sb05g005450 Sorghum bicolor Sb05g005450 I 0.887
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.885
Pavir.Ha00897 Panicum virgatum Pavir.Ha00897 I 0.885
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.885
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.884
GRMZM2G312201 Zea mays GRMZM2G312201 N 0.883
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.881
OB11G14310 Oryza brachyantha OB11G14310 I 0.880
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.879
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.879
Sb03g037940 Sorghum bicolor Sb03g037940 I 0.879
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.879
GRMZM2G068973 Zea mays GRMZM2G068973 I 0.879
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.879
OB05G24820 Oryza brachyantha OB05G24820 I 0.878
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.878
mgf004020m Mimulus guttatus mgf004020m I 0.878
Aquca_014_00941 Aquilegia coerulea Aquca_014_00941 I 0.877
OPUNC01G34000 Oryza punctata OPUNC01G34000 I 0.877
LPERR03G32860 Leersia perrieri LPERR03G32860 I 0.877
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.872
Lus10029692.g Linum usitatissimum Lus10029692.g N 0.872
Pavir.Ea03233 Panicum virgatum Pavir.Ea03233 I 0.872
Pavir.Eb03542 Panicum virgatum Pavir.Eb03542 I 0.872
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.871