CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g036240m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g036240m.g
T298686_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g036240m
NAC/NAM
7
133
PPGFRFHPTDVELIKYYLKRKVMGRKFGFEAIAEVDIYKHAPWDLPDKSSLRSGDLKWYFFCPREKKYANGARMNRATEFGYWKTTGKDRPVQYNNEVVGMIKTLVFHRGKAPRGDRTDWVMHEYRI
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
0.974
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.948
30136.m001048
Ricinus communis
30136.m001048
N
0.943
GSMUA_Achr11G09000_001
Musa acuminata
GSMUA_Achr11G09000_001
N
0.933
PDK_20s1369501g001
Phoenix dactylifera
PDK_20s1369501g001
N
0.929
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
0.927
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N
0.925
mgf025137m
Mimulus guttatus
mgf025137m
N
0.924
TCM_028313
Theobroma cacao
TCM_028313
N
0.919
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
0.919
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.916
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.916
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
0.916
NAC082
Arabidopsis thaliana
AT5G09330
N
0.915
Lus10020896.g
Linum usitatissimum
Lus10020896.g
N
0.914
Bo3g101690
Brassica oleracea
Bo3g101690
I
0.912
Bra024263
Brassica rapa
Bra024263
I
0.912
evm.TU.supercontig_42.145
Carica papaya
evm.TU.supercontig_42.145
I
0.911
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
0.906
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.903
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.903
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.903
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
0.902
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
0.902
Cla008570
Citrullus lanatus
Cla008570
N
0.901
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
0.894
gene27615-v1.0-hybrid
Fragaria vesca
gene27615-v1.0-hybrid
N
0.892
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
0.888
POPTR_0005s06040
Populus trichocarpa
POPTR_0005s06040
N
0.888
TCM_028311
Theobroma cacao
TCM_028311
N
0.884
Bostr.0568s0398
Boechera stricta
Bostr.0568s0398
I
0.884
GLYMA06G15840
Glycine max
GLYMA06G15840
N
0.878
AMTR_s00071p00055960
Amborella trichopoda
AMTR_s00071p00055960
I
0.877
Eucgr.I00213
Eucalyptus grandis
Eucgr.I00213
N
0.874