CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g037709m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g037709m.g
T298695_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g037709m
NAC/NAM
4
136
LTGIGFRPLDEEIIDLLKKKRLDPGFTVQTIKEIDFYSFDPWDLAGFSEFQSMEDVWYFFSKPKYRGAKRKRSGQQQHRKTKSGTWKKTGSGSEMKRKNSTEVIGNKDYLVFIHDDATSEKANTKWLMHEIAI
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g021772m.g
Citrus sinensis
orange1.1g021772m.g
N
0.957
orange1.1g047949m.g
Citrus sinensis
orange1.1g047949m.g
N
0.945
orange1.1g040419m.g
Citrus sinensis
orange1.1g040419m.g
N
0.941
orange1.1g016435m.g
Citrus sinensis
orange1.1g016435m.g
N
0.927
orange1.1g017142m.g
Citrus sinensis
orange1.1g017142m.g
N
0.923
Bo5g002830
Brassica oleracea
Bo5g002830
N
0.891
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.882
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.882
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.881
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.877
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.877
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.877
OS01G0393100
Oryza sativa
OS01G0393100
I
0.877
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.877
OS01G0104500
Oryza sativa
OS01G0104500
I
0.877
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.877
OBART01G16620
Oryza barthii
OBART01G16620
I
0.877
OBART01G00360
Oryza barthii
OBART01G00360
I
0.877
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.877
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.877
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.877
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.877
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.877
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.877
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.877
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.875
OB01G10300
Oryza brachyantha
OB01G10300
I
0.873
OPUNC01G00320
Oryza punctata
OPUNC01G00320
I
0.873