CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g040419m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g040419m.g
T298702_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g040419m
NAC/NAM
4
132
LVGFRFYPTDEEIIRLLKKKRLDPAFFVHTIKEIDFYSFEPWELPCHSEIQSEEEVWYFFCEPDYKYAKSRRVNRGTNEGTWKKTGNGSKIKRKYSTEVIGTKRILSFSCHDSASKKAKTEWVMHEIAV
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g047949m.g
Citrus sinensis
orange1.1g047949m.g
N
0.991
orange1.1g021772m.g
Citrus sinensis
orange1.1g021772m.g
N
0.978
orange1.1g017142m.g
Citrus sinensis
orange1.1g017142m.g
N
0.970
orange1.1g016435m.g
Citrus sinensis
orange1.1g016435m.g
N
0.964
orange1.1g037709m.g
Citrus sinensis
orange1.1g037709m.g
N
0.941
MDP0000249947
Malus domestica
MDP0000249947
N
0.901
Pm028720
Prunus mume
Pm028720
N
0.883
MDP0000198108
Malus domestica
MDP0000198108
N
0.876
PRUPE_ppa019865mg
Prunus persica
PRUPE_ppa019865mg
N
0.875