Pavir.Ca02638 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ca02638 T298792_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca02638.1.p NAC/NAM 28 159

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J31204 Panicum virgatum Pavir.J31204 I 0.954
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.937
BRADI1G58057 Brachypodium distachyon BRADI1G58057 I 0.934
Pavir.Cb00167 Panicum virgatum Pavir.Cb00167 I 0.933
LPERR12G16500 Leersia perrieri LPERR12G16500 N 0.922
OMERI12G14510 Oryza meridionalis OMERI12G14510 I 0.922
OGLUM12G21360 Oryza glumaepatula OGLUM12G21360 I 0.921
ORUFI12G21970 Oryza rufipogon ORUFI12G21970 I 0.921
OBART12G19610 Oryza barthii OBART12G19610 I 0.921
ORGLA12G0169600 Oryza glaberrima ORGLA12G0169600 I 0.921
ONIVA12G18630 Oryza nivara ONIVA12G18630 I 0.921
Pavir.Ba02443 Panicum virgatum Pavir.Ba02443 I 0.919
OPUNC12G17870 Oryza punctata OPUNC12G17870 I 0.918
Si022714m.g Setaria italica Si022714m.g I 0.911
OB12G26370 Oryza brachyantha OB12G26370 N 0.900
BGIOSGA035784 Oryza indica BGIOSGA035784 N 0.899
Pavir.J03639 Panicum virgatum Pavir.J03639 I 0.899
Pavir.J26531 Panicum virgatum Pavir.J26531 I 0.899
Lus10031767.g Linum usitatissimum Lus10031767.g I 0.893
Lus10031189.g Linum usitatissimum Lus10031189.g I 0.893
OS03G0777000 Oryza sativa OS03G0777000 I 0.892
ORUFI03G37500 Oryza rufipogon ORUFI03G37500 I 0.892
ONIVA10G12510 Oryza nivara ONIVA10G12510 I 0.892
BGIOSGA013656 Oryza indica BGIOSGA013656 I 0.892
Si036447m.g Setaria italica Si036447m.g I 0.885
OGLUM03G35790 Oryza glumaepatula OGLUM03G35790 I 0.884
ORGLA03G0330500 Oryza glaberrima ORGLA03G0330500 I 0.883
OMERI03G33230 Oryza meridionalis OMERI03G33230 I 0.883
OBART03G36060 Oryza barthii OBART03G36060 I 0.883
OPUNC03G33030 Oryza punctata OPUNC03G33030 I 0.882
Sb01g006410 Sorghum bicolor Sb01g006410 I 0.880
OB03G42970 Oryza brachyantha OB03G42970 I 0.878
GSMUA_Achr5G02170_001 Musa acuminata GSMUA_Achr5G02170_001 I 0.876
GRMZM2G475014 Zea mays GRMZM2G475014 I 0.876
Traes_5BL_3900B9128 Triticum aestivum Traes_5BL_3900B9128 I 0.873
F775_15555 Aegilops tauschii F775_15555 N 0.871
LPERR03G30390 Leersia perrieri LPERR03G30390 I 0.871
BRADI1G06970 Brachypodium distachyon BRADI1G06970 I 0.871
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.870