CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10008461
(
Chelonia mydas
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05224 (NDT80_PhoG)
IPR007888
Cmyd_10008461
T300182_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
myrf
M02384_2.00
Danio rerio
TGGTACCR
YGGTACCA
PBM
Weirauch et al.(2014)
pTH8654
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10008461
Ndt80/PhoG
657
804
AFVCQKKNHFQITIHISVVGNPKYVKTQLGLKPIEKFYLKTFGIKADAPNQIITIEQSQSDRSKKSFNPVKLDLPADQATKVTLGRLHFSETTANNMRKKGKPNPDQRYFMLVVGLYAVSQDQSYLLSAHVSERIIVRASNPGQFEND
Links
Other
Ndt80/PhoG
family TFs
Other
Chelonia mydas
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSMMUG00000006501
Macaca mulatta
ENSMMUG00000006501
I
0.926
Alligator_sinensis_CCG014201.1
Alligator sinensis
Alligator_sinensis_CCG014201.1
N
0.867
ENSSTOG00000020113
Ictidomys tridecemlineatus
ENSSTOG00000020113
N
0.860
ENSMPUG00000017495
Mustela putorius furo
ENSMPUG00000017495
N
0.860
Aan_R014790
Calypte anna
Aan_R014790
N
0.860
Afo_R009725
Aptenodytes forsteri
Afo_R009725
N
0.852
Tal_R011346
Tyto alba
Tal_R011346
N
0.852
MYRFL
Meleagris gallopavo
ENSMGAG00000010606
N
0.846
MYRFL
Oryctolagus cuniculus
ENSOCUG00000002982
N
0.846
MYRFL
Gallus gallus
ENSGALG00000019352
N
0.846
ENSAMEG00000011926
Ailuropoda melanoleuca
ENSAMEG00000011926
N
0.839
ENSFALG00000010237
Ficedula albicollis
ENSFALG00000010237
N
0.839
ENSAPLG00000012837
Anas platyrhynchos
ENSAPLG00000012837
N
0.839
Brh_R001107
Buceros rhinoceros
Brh_R001107
N
0.838
MYRFL
Myotis lucifugus
ENSMLUG00000009508
N
0.832
ENSMMUP00000039187
Macaca fascicularis
ENSMMUP00000039187
N
0.832
MYRFL
Otolemur garnettii
ENSOGAG00000028145
N
0.832
ENSBTAP00000019581-D1
Bos grunniens
ENSBTAP00000019581-D1
N
0.832
ENSPANG00000002677
Papio anubis
ENSPANG00000002677
N
0.832
ENSOARG00000020232
Ovis aries
ENSOARG00000020232
I
0.832
MYRFL
Bos taurus
ENSBTAG00000014829
N
0.832
MYRFL
Homo sapiens
ENSG00000166268
N
0.832
MYRFL
Dasypus novemcinctus
ENSDNOG00000044488
N
0.832
MYRFL
Felis catus
ENSFCAG00000031998
N
0.825
ENSCJAG00000036263
Callithrix jacchus
ENSCJAG00000036263
N
0.825
Myrfl
Mus musculus
ENSMUSG00000034057
N
0.825
ENSTGUG00000007004
Taeniopygia guttata
ENSTGUG00000007004
N
0.825
Gfo_R003999
Geospiza fortis
Gfo_R003999
N
0.818
MYRFL
Anolis carolinensis
ENSACAG00000004738
N
0.818
MYRFL
Ornithorhynchus anatinus
ENSOANG00000005958
N
0.818
MYRFL
Cavia porcellus
ENSCPOG00000013850
N
0.811
MYRFL
Loxodonta africana
ENSLAFG00000001286
N
0.811
Myrfl
Rattus norvegicus
ENSRNOG00000021833
N
0.804
MYRFL
Monodelphis domestica
ENSMODG00000020385
N
0.783
ENSLOCG00000016212
Lepisosteus oculatus
ENSLOCG00000016212
N
0.776
Myotis_brandtii_MRF_10004739
Myotis brandtii
Myotis_brandtii_MRF_10004739
N
0.755
Tal_R006175
Tyto alba
Tal_R006175
I
0.738
Afo_R010549
Aptenodytes forsteri
Afo_R010549
I
0.738
Aan_R010750
Calypte anna
Aan_R010750
I
0.738
ENSGALG00000020522
Gallus gallus
ENSGALG00000020522
I
0.734
ENSAPLG00000006054
Anas platyrhynchos
ENSAPLG00000006054
I
0.734
Brh_R007745
Buceros rhinoceros
Brh_R007745
I
0.734
Gfo_R011942
Geospiza fortis
Gfo_R011942
I
0.734
ENSFALG00000011806
Ficedula albicollis
ENSFALG00000011806
I
0.734
Pvit_15884
Pogona vitticeps
Pvit_15884
I
0.734
MYRF
Meleagris gallopavo
ENSMGAG00000004733
I
0.734
ENSTGUG00000006600
Taeniopygia guttata
ENSTGUG00000006600
I
0.734
ENSPSIG00000015590
Pelodiscus sinensis
ENSPSIG00000015590
I
0.727
ENSONIG00000015523
Oreochromis niloticus
ENSONIG00000015523
I
0.720
ENSLACG00000016455
Latimeria chalumnae
ENSLACG00000016455
I
0.720
ENSSHAG00000002443
Sarcophilus harrisii
ENSSHAG00000002443
I
0.713
MYRF
Ornithorhynchus anatinus
ENSOANG00000003410
I
0.713
ENSAMXG00000015793
Astyanax mexicanus
ENSAMXG00000015793
I
0.713
myrf
Xenopus tropicalis
XB-GENE-1020968
I
0.713
ENSPFOG00000011050
Poecilia formosa
ENSPFOG00000011050
I
0.713
ENSXMAG00000003748
Xiphophorus maculatus
ENSXMAG00000003748
I
0.713
CLEC012740
Cimex lectularius
CLEC012740
N
0.708
ENSMEUG00000004200
Macropus eugenii
ENSMEUG00000004200
I
0.707
myrf
Danio rerio
ENSDARG00000078676
D
0.706
MYRF
Oryzias latipes
ENSORLG00000006459
I
0.706
CABZ01077402.1
Danio rerio
ENSDARG00000101645
N
0.706
Alligator_sinensis_CCG012901.1
Alligator sinensis
Alligator_sinensis_CCG012901.1
I
0.706
ENSGMOG00000017696
Gadus morhua
ENSGMOG00000017696
I
0.706
Myotis_brandtii_MRF_10005301
Myotis brandtii
Myotis_brandtii_MRF_10005301
I
0.704