CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG012901.1
(
Alligator sinensis
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05224 (NDT80_PhoG)
IPR007888
Alligator_sinensis_CCG012901.1
T300177_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYRF
M02385_2.00
Homo sapiens
TGGTACCA
TGGTACCA
PBM
Weirauch et al.(2014)
pTH9310
0.965
0.965
Myrf
M02386_2.00
Mus musculus
NNGTRHSNNN
NNNSDYACNN
PBM
Weirauch et al.(2014)
pTH8554
0.965
0.965
myrf
M02384_2.00
Danio rerio
TGGTACCR
YGGTACCA
PBM
Weirauch et al.(2014)
pTH8654
0.818
0.818
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG012901.1
Ndt80/PhoG
327
474
AFVCQKKNHFQVTVYIGMLGDPKYVKTPEGLKPLECFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPSEQVTKVTVGRLHFSETTANNMRKKGKPNPDQRYFMLVVALQAHAQSQNYTLAAHISERIIVRASNPGQFESD
Links
Other
Ndt80/PhoG
family TFs
Other
Alligator sinensis
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYRF
Felis catus
ENSFCAG00000013683
I
0.965
Myrf
Rattus norvegicus
ENSRNOG00000028274
I
0.965
Myrf
Dipodomys ordii
ENSDORG00000002029
I
0.965
MYRF
Pteropus vampyrus
ENSPVAG00000012342
I
0.965
MYRF
Pan troglodytes
ENSPTRG00000003749
I
0.965
Myrf
Mus musculus
ENSMUSG00000036098
D
0.965
MYRF
Gorilla gorilla
ENSGGOG00000012529
I
0.965
MYRF
Sus scrofa
ENSSSCG00000013078
I
0.965
MYRF
Homo sapiens
ENSG00000124920
D
0.965
ENSAMEG00000016669
Ailuropoda melanoleuca
ENSAMEG00000016669
I
0.965
MYRF
Canis familiaris
ENSCAFG00000016062
I
0.965
ENSPANG00000013413
Papio anubis
ENSPANG00000013413
I
0.958
ENSSTOG00000000529
Ictidomys tridecemlineatus
ENSSTOG00000000529
I
0.958
ENSPPYG00000003180
Pongo abelii
ENSPPYG00000003180
I
0.958
MYRF
Otolemur garnettii
ENSOGAG00000010786
I
0.958
ENSCSAG00000006452
Chlorocebus sabaeus
ENSCSAG00000006452
I
0.958
MYRF
Oryctolagus cuniculus
ENSOCUG00000003269
I
0.958
ENSMPUG00000014126
Mustela putorius furo
ENSMPUG00000014126
I
0.958
MYRF
Callithrix jacchus
ENSCJAG00000019218
I
0.958
MYRF
Macaca mulatta
ENSMMUG00000006655
I
0.958
MYRF
Bos taurus
ENSBTAG00000006990
I
0.951
MYRF
Dasypus novemcinctus
ENSDNOG00000005294
I
0.951
MYRF
Cavia porcellus
ENSCPOG00000013543
I
0.944
MYRF
Meleagris gallopavo
ENSMGAG00000004733
I
0.923
Gfo_R011942
Geospiza fortis
Gfo_R011942
I
0.923
ENSAPLG00000006054
Anas platyrhynchos
ENSAPLG00000006054
I
0.923
MYRF
Equus caballus
ENSECAG00000021799
I
0.923
ENSFALG00000011806
Ficedula albicollis
ENSFALG00000011806
I
0.923
ENSBTAP00000009187-D1
Bos grunniens
ENSBTAP00000009187-D1
I
0.923
ENSGALG00000020522
Gallus gallus
ENSGALG00000020522
I
0.923
ENSTGUG00000006600
Taeniopygia guttata
ENSTGUG00000006600
I
0.923
ENSPSIG00000015590
Pelodiscus sinensis
ENSPSIG00000015590
I
0.916
ENSP00000278836
Macaca fascicularis
ENSP00000278836
I
0.916
ENSMEUG00000004200
Macropus eugenii
ENSMEUG00000004200
I
0.902
MYRF
Procavia capensis
ENSPCAG00000017079
I
0.901
Brh_R007745
Buceros rhinoceros
Brh_R007745
I
0.895
MYRF
Myotis lucifugus
ENSMLUG00000010326
I
0.895
ENSOARG00000013482
Ovis aries
ENSOARG00000013482
I
0.895
Afo_R010549
Aptenodytes forsteri
Afo_R010549
I
0.894
Aan_R010750
Calypte anna
Aan_R010750
I
0.894
Tal_R006175
Tyto alba
Tal_R006175
I
0.894
Pvit_15884
Pogona vitticeps
Pvit_15884
I
0.881
ENSLACG00000016455
Latimeria chalumnae
ENSLACG00000016455
I
0.881
ENSSHAG00000002443
Sarcophilus harrisii
ENSSHAG00000002443
I
0.867
MYRF
Anolis carolinensis
ENSACAG00000017691
I
0.846
ENSAMXG00000015793
Astyanax mexicanus
ENSAMXG00000015793
I
0.839
myrf
Xenopus tropicalis
XB-GENE-1020968
I
0.832
ENSGMOG00000017696
Gadus morhua
ENSGMOG00000017696
I
0.832
MYRF
Ornithorhynchus anatinus
ENSOANG00000003410
I
0.832
ENSXMAG00000003748
Xiphophorus maculatus
ENSXMAG00000003748
I
0.832
ENSPFOG00000011050
Poecilia formosa
ENSPFOG00000011050
I
0.825
ENSONIG00000015523
Oreochromis niloticus
ENSONIG00000015523
I
0.825
myrf
Danio rerio
ENSDARG00000078676
D
0.818
myrf
Gasterosteus aculeatus
ENSGACG00000005416
I
0.818
MYRF
Oryzias latipes
ENSORLG00000006459
I
0.818
ENSNLEG00000003069
Nomascus leucogenys
ENSNLEG00000003069
I
0.811
MYRF
Takifugu rubripes
ENSTRUG00000005197
I
0.811
myrf.L
Xenopus laevis
XB-GENE-1020972
I
0.804
MYRF
Tetraodon nigroviridis
ENSTNIG00000016074
I
0.797
MYRFL
Gallus gallus
ENSGALG00000019352
N
0.706
ENSFALG00000010237
Ficedula albicollis
ENSFALG00000010237
N
0.706
CABZ01077402.1
Danio rerio
ENSDARG00000101645
N
0.706
Ogr07579
Ophisaurus gracilis
Ogr07579
N
0.706
MYRFL
Meleagris gallopavo
ENSMGAG00000010606
N
0.706
Cmyd_10008461
Chelonia mydas
Cmyd_10008461
I
0.706
ENSMPUG00000017495
Mustela putorius furo
ENSMPUG00000017495
N
0.706
ENSOARG00000020232
Ovis aries
ENSOARG00000020232
I
0.706
ENSMMUG00000006501
Macaca mulatta
ENSMMUG00000006501
I
0.704