CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000278836
(
Macaca fascicularis
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05224 (NDT80_PhoG)
IPR007888
ENSP00000278836
T300186_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene encodes a transcription factor that is required for central nervous system myelination and may regulate oligodendrocyte differentiation. It is thought to act by increasing the expression of genes that effect myelin production but may also directly promote myelin gene expression. Loss of a similar gene in mouse models results in severe demyelination. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2014]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYRF
M02385_2.00
Homo sapiens
TGGTACCA
TGGTACCA
PBM
Weirauch et al.(2014)
pTH9310
0.965
0.965
Myrf
M02386_2.00
Mus musculus
NNGTRHSNNN
NNNSDYACNN
PBM
Weirauch et al.(2014)
pTH8554
0.965
0.965
myrf
M02384_2.00
Danio rerio
TGGTACCR
YGGTACCA
PBM
Weirauch et al.(2014)
pTH8654
0.794
0.794
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000278836
Ndt80/PhoG
345
490
AFVCQKKNHFQVTVYIGMLGEPKFVKTPEGLKPLDCFYLKLHGLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLHFSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD
Links
Other
Ndt80/PhoG
family TFs
Other
Macaca fascicularis
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy