Solyc03g118420.2 (Solanum lycopersicum)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 Solyc03g118420.2 T300808_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g118420.2.1 NFX 270 287
Solyc03g118420.2.1 NFX 325 343
Solyc03g118420.2.1 NFX 389 407
Solyc03g118420.2.1 NFX 447 465
Solyc03g118420.2.1 NFX 505 516
Solyc03g118420.2.1 NFX 543 561
Solyc03g118420.2.1 NFX 653 673
Solyc03g118420.2.1 NFX 681 712

Links

Other NFX family TFs
Other Solanum lycopersicum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400014182 Solanum tuberosum PGSC0003DMG400014182 N 0.859
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N 0.831
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N 0.824
VIT_17s0000g01920 Vitis vinifera VIT_17s0000g01920 N 0.812
Bostr.15697s0430 Boechera stricta Bostr.15697s0430 N 0.810
chr2.LjT01H08.70.nc Lotus japonicus chr2.LjT01H08.70.nc N 0.792
GRMZM2G409627 Zea mays GRMZM2G409627 N 0.782
GRMZM2G307823 Zea mays GRMZM2G307823 N 0.782
Bo8g059130 Brassica oleracea Bo8g059130 N 0.766
AMTR_s00060p00124510 Amborella trichopoda AMTR_s00060p00124510 N 0.761
MTR_4g027040 Medicago truncatula MTR_4g027040 N 0.761
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.759
Bra018458 Brassica rapa Bra018458 N 0.759
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.752
MDP0000280911 Malus domestica MDP0000280911 N 0.741
Pm025049 Prunus mume Pm025049 N 0.741
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.731
27791.m000083 Ricinus communis 27791.m000083 N 0.727
Cagra.4395s0205 Capsella grandiflora Cagra.4395s0205 N 0.718