CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10003051m.g
(
Capsella rubella
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
Carubv10003051m.g
T300960_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10003051m
NFX
195
212
CGHCCLLLCHPGPCASCP
Carubv10003051m
NFX
230
265
CGHKHFSCGDVCDKVLDCNIHKCREICHDGECPPCR
Carubv10003051m
NFX
300
318
CGKHVCERGCHSGECGLCP
Carubv10003051m
NFX
354
373
CGYHRCPERCHRGPCLETCR
Carubv10003051m
NFX
407
425
CARHACRRRCCDGECPPCS
Carubv10003051m
NFX
428
452
CGKRLRCRNHKCQSPCHQGPCAPCP
Carubv10003051m
NFX
499
511
PHKCHYGACPPCR
Carubv10003051m
NFX
520
531
CGHKCTQRCHGP
Carubv10003051m
NFX
602
613
CGNHYCSFTCHP
Carubv10003051m
NFX
643
660
CQHPCPRRCHPGDCPPCK
Carubv10003051m
NFX
706
726
CTHLCPEICHPGQCPLPEKCM
Links
Other
NFX
family TFs
Other
Capsella rubella
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy