Carubv10003051m.g (Capsella rubella)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Carubv10003051m.g T300960_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003051m NFX 195 212
Carubv10003051m NFX 230 265
Carubv10003051m NFX 300 318
Carubv10003051m NFX 354 373
Carubv10003051m NFX 407 425
Carubv10003051m NFX 428 452
Carubv10003051m NFX 499 511
Carubv10003051m NFX 520 531
Carubv10003051m NFX 602 613
Carubv10003051m NFX 643 660
Carubv10003051m NFX 706 726

Links

Other NFX family TFs
Other Capsella rubella TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WUBG_12533 Wuchereria bancrofti WUBG_12533 N 0.000
TCLT_0000283601 Thelazia callipaeda TCLT_0000283601 N 0.000
OFLC_0000265401 Onchocerca flexuosa OFLC_0000265401 N 0.000
nOo.2.0.1.g04816 Onchocerca ochengi nOo.2.0.1.g04816 N 0.000
nLs.2.1.2.g02423 Litomosoides sigmodontis nLs.2.1.2.g02423 N 0.000
nDi.2.2.2.g00283 Dirofilaria immitis nDi.2.2.2.g00283 N 0.000
nAv.1.0.1.g05007 Acanthocheilonema viteae nAv.1.0.1.g05007 N 0.000
EEL_0000950601 Elaeophora elaphi EEL_0000950601 N 0.000
DME_0000549101 Dracunculus medinensis DME_0000549101 N 0.000
BXY_0444700 Bursaphelenchus xylophilus BXY_0444700 N 0.000
ASU_04287 Ascaris suum ASU_04287 N 0.000
WBGene00247562 Onchocerca volvulus WBGene00247562 N 0.000
LOAG_16989 Loa loa LOAG_16989 N 0.000
Bm1941 Brugia malayi Bm1941 N 0.000
TCNE_0001867501 Toxocara canis TCNE_0001867501 N 0.000