CBN04619 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN04619 T301687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC

GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.954 0.686
nhr-70
M00695_2.00
Caenorhabditis elegans
NYTGTAGYYD

HRRCTACARN
PBM
Narasimhan et al.(2015)
pTH9174
0.865 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN04619 Nuclear receptor 6 75

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.865
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.954
L892_g8140 Steinernema scapterisci L892_g8140 I 0.861
L892_g10708 Steinernema scapterisci L892_g10708 I 0.862
L889_g987 Steinernema feltiae L889_g987 I 0.864
L889_g9698 Steinernema feltiae L889_g9698 I 0.864
L889_g10781 Steinernema feltiae L889_g10781 I 0.848
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.894
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.849
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.838
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.776
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.862
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.923
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.944
L892_g8144 Steinernema scapterisci L892_g8144 I 0.893
L892_g8145 Steinernema scapterisci L892_g8145 I 0.838
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.874
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.893
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.885
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.887
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.810
NECAME_01500 Necator americanus NECAME_01500 I 0.836
L898_g9580 Steinernema monticolum L898_g9580 I 0.773
L898_g28806 Steinernema monticolum L898_g28806 I 0.896
L898_g18539 Steinernema monticolum L898_g18539 I 0.806
L898_g10723 Steinernema monticolum L898_g10723 I 0.843
L893_g9517 Steinernema glaseri L893_g9517 I 0.876
L893_g4569 Steinernema glaseri L893_g4569 I 0.838
L893_g2090 Steinernema glaseri L893_g2090 I 0.918
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.856
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.771
CRE07801 Caenorhabditis remanei CRE07801 I 0.845
CJA10576 Caenorhabditis japonica CJA10576 I 0.971
CJA07390 Caenorhabditis japonica CJA07390 I 0.923
CJA04414 Caenorhabditis japonica CJA04414 I 0.923
CBN24070 Caenorhabditis brenneri CBN24070 I 0.873
CBN18264 Caenorhabditis brenneri CBN18264 I 0.787
CBN16902 Caenorhabditis brenneri CBN16902 I 0.916
CBN03769 Caenorhabditis brenneri CBN03769 I 0.936
CBN03440 Caenorhabditis brenneri CBN03440 I 0.811
CBG20699 Caenorhabditis briggsae CBG20699 I 0.860
CBG16375 Caenorhabditis briggsae CBG16375 I 0.973
CBG12152 Caenorhabditis briggsae CBG12152 I 0.929
CBG04789 Caenorhabditis briggsae CBG04789 I 0.793
CBG03688 Caenorhabditis briggsae CBG03688 I 0.754
CBG03687 Caenorhabditis briggsae CBG03687 I 0.904
CRE09011 Caenorhabditis remanei CRE09011 I 0.755
CRE17310 Caenorhabditis remanei CRE17310 I 0.887
CRE17354 Caenorhabditis remanei CRE17354 I 0.855
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.972
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.870
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.904
PPA29361 Pristionchus pacificus PPA29361 I 0.854
PPA10478 Pristionchus pacificus PPA10478 I 0.885
PPA08785 Pristionchus pacificus PPA08785 I 0.887
CRE27659 Caenorhabditis remanei CRE27659 I 0.972
CRE17355 Caenorhabditis remanei CRE17355 I 0.781
CRE27174 Caenorhabditis remanei CRE27174 I 0.906
CRE18529 Caenorhabditis remanei CRE18529 I 0.929
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.748
L892_g8146 Steinernema scapterisci L892_g8146 N 0.752
L889_g16048 Steinernema feltiae L889_g16048 N 0.753
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.786
BXY_1188900 Bursaphelenchus xylophilus BXY_1188900 N 0.756
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.771
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.760