CBN12210 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN12210 T301743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.772 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN12210 Nuclear receptor 1 70

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_00181 Ancylostoma caninum ANCCAN_00181 N 0.863
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.812
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.747
CBG06601 Caenorhabditis briggsae CBG06601 I 0.804
CBG22870 Caenorhabditis briggsae CBG22870 I 0.789
CBG14515 Caenorhabditis briggsae CBG14515 I 0.997
CBG09567 Caenorhabditis briggsae CBG09567 I 0.772
CBG06611 Caenorhabditis briggsae CBG06611 I 0.804
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.828
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.772
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.825
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.773
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.997
CJA09697 Caenorhabditis japonica CJA09697 I 0.779
CJA02156 Caenorhabditis japonica CJA02156 I 0.997
CJA28065 Caenorhabditis japonica CJA28065 I 0.763
CRE30948 Caenorhabditis remanei CRE30948 I 0.769
CRE00301 Caenorhabditis remanei CRE00301 I 0.997
CRE08691 Caenorhabditis remanei CRE08691 I 0.824
CRE18430 Caenorhabditis remanei CRE18430 I 0.807
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.831
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.812
HPLM_0000640101 Haemonchus placei HPLM_0000640101 N 0.853
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.812
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.754
NECAME_00110 Necator americanus NECAME_00110 N 0.829
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.795
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.801
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.807
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.808
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.794
L889_g6692 Steinernema feltiae L889_g6692 I 0.747
L889_g6695 Steinernema feltiae L889_g6695 I 0.750
L898_g3514 Steinernema monticolum L898_g3514 I 0.771
L898_g12798 Steinernema monticolum L898_g12798 I 0.778
L892_g2781 Steinernema scapterisci L892_g2781 I 0.755
L892_g14834 Steinernema scapterisci L892_g14834 N 0.756
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.798
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.805
SMUV_0000241501 Syphacia muris SMUV_0000241501 N 0.794