CBN28791 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN28791 T301857_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.973 0.700
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.972 0.700
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN28791 Nuclear receptor 29 102

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG23381 Caenorhabditis briggsae CBG23381 I 0.992
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.992
CRE27052 Caenorhabditis remanei CRE27052 I 0.991
CJA03696 Caenorhabditis japonica CJA03696 I 0.986
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.973
CBG23380 Caenorhabditis briggsae CBG23380 D 0.972
CRE27050 Caenorhabditis remanei CRE27050 I 0.972
CBN28497 Caenorhabditis brenneri CBN28497 I 0.972
CRE27051 Caenorhabditis remanei CRE27051 I 0.941
nhr-208 Caenorhabditis elegans WBGene00011099 I 0.909
CRE27053 Caenorhabditis remanei CRE27053 I 0.887
CBN29725 Caenorhabditis brenneri CBN29725 I 0.887
nhr-206 Caenorhabditis elegans WBGene00011097 I 0.878
L893_g28857 Steinernema glaseri L893_g28857 I 0.852
L889_g1557 Steinernema feltiae L889_g1557 I 0.845
L898_g9866 Steinernema monticolum L898_g9866 I 0.845
CBG23379 Caenorhabditis briggsae CBG23379 I 0.840
L892_g4169 Steinernema scapterisci L892_g4169 I 0.838
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.825
nhr-207 Caenorhabditis elegans WBGene00011098 I 0.824
NECAME_08394 Necator americanus NECAME_08394 I 0.823
CJA08896 Caenorhabditis japonica CJA08896 I 0.820
CBG10855 Caenorhabditis briggsae CBG10855 I 0.820
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.820
CBN24827 Caenorhabditis brenneri CBN24827 I 0.819
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.809
PPA21777 Pristionchus pacificus PPA21777 I 0.807
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.805
ASU_03657 Ascaris suum ASU_03657 I 0.803
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.803
CRE00149 Caenorhabditis remanei CRE00149 I 0.800
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.796
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.792
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.789
NECAME_01944 Necator americanus NECAME_01944 I 0.787
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.787
LOAG_16377 Loa loa LOAG_16377 I 0.785
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.785
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.785
PPA24481 Pristionchus pacificus PPA24481 I 0.784
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.784
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.783
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.782
PPA29597 Pristionchus pacificus PPA29597 I 0.778
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.775
L893_g3565 Steinernema glaseri L893_g3565 I 0.774
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.773
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.772
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.771
L892_g17612 Steinernema scapterisci L892_g17612 I 0.767
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.752
CJA00680 Caenorhabditis japonica CJA00680 I 0.748
Minc11307 Meloidogyne incognita Minc11307 I 0.748