CJA00680 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA00680 T301927_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.935 0.629
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.848 0.586
nhr-204
M00704_2.00
Caenorhabditis elegans
NDNTGRTMHN

NDKAYCANHN
PBM
Narasimhan et al.(2015)
pTH10028
0.787 0.471
CBG26996_CONSTRUCT
M01300_2.00
PBM CONSTRUCTS
NNNNTGRWMN

NKWYCANNNN
PBM
Lambert et al.(2019)
pTH11460
0.785 0.486
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD

HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.769 0.614
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN

NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.764 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA00680 Nuclear receptor 73 144

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CRE00606 Caenorhabditis remanei CRE00606 I 0.992
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.992
CBG10857 Caenorhabditis briggsae CBG10857 I 0.992
L893_g28857 Steinernema glaseri L893_g28857 I 0.979
L898_g9866 Steinernema monticolum L898_g9866 I 0.976
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.976
L889_g1557 Steinernema feltiae L889_g1557 I 0.976
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.975
L889_g1891 Steinernema feltiae L889_g1891 I 0.974
NECAME_08394 Necator americanus NECAME_08394 I 0.974
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.973
L892_g17612 Steinernema scapterisci L892_g17612 I 0.973
PPA24481 Pristionchus pacificus PPA24481 I 0.973
PPA21777 Pristionchus pacificus PPA21777 I 0.973
L893_g3565 Steinernema glaseri L893_g3565 I 0.973
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.972
L892_g4169 Steinernema scapterisci L892_g4169 I 0.972
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.971
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.970
NECAME_01944 Necator americanus NECAME_01944 I 0.969
CRE00149 Caenorhabditis remanei CRE00149 I 0.969
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.967
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.966
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.966
CJA08896 Caenorhabditis japonica CJA08896 I 0.966
CBN24827 Caenorhabditis brenneri CBN24827 I 0.966
CBG10855 Caenorhabditis briggsae CBG10855 I 0.966
ASU_03657 Ascaris suum ASU_03657 I 0.966
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.965
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.964
PPA29597 Pristionchus pacificus PPA29597 I 0.963
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.963
LOAG_16377 Loa loa LOAG_16377 I 0.957
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.957
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.956
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.954
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.948
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.945
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.945
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.945
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.941
PPA06637 Pristionchus pacificus PPA06637 I 0.938
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.937
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.935
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.935
ASU_03870 Ascaris suum ASU_03870 I 0.935
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.935
CBN18198 Caenorhabditis brenneri CBN18198 I 0.935
CBG03844 Caenorhabditis briggsae CBG03844 I 0.935
CBN20749 Caenorhabditis brenneri CBN20749 I 0.935
CRE08259 Caenorhabditis remanei CRE08259 I 0.935
LOAG_08615 Loa loa LOAG_08615 I 0.934
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.934
Bm4980 Brugia malayi Bm4980 I 0.933
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.933
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.932
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.932
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.932
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.931
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.931
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.931
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.931
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.930
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.928
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.927
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.927
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.926
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.926
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.926
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.926
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.926
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.926
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.926
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.920
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.918
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.918
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.918
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.918
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.917
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.917
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.917
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.917
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.916
L893_g13285 Steinernema glaseri L893_g13285 I 0.913
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.913
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.913
L898_g26357 Steinernema monticolum L898_g26357 I 0.912
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.912
L889_g17247 Steinernema feltiae L889_g17247 I 0.912
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.907
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.906
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.894
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.892
PPA10975 Pristionchus pacificus PPA10975 N 0.890
PPA24468 Pristionchus pacificus PPA24468 I 0.885
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.885
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.882
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.878
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.878
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.878
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.874
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.870
CRE27053 Caenorhabditis remanei CRE27053 I 0.869
CBN29725 Caenorhabditis brenneri CBN29725 I 0.869
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.867
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.867
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.867
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.860
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.855
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.854
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.854
L893_g25227 Steinernema glaseri L893_g25227 I 0.853
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.853
ASU_12501 Ascaris suum ASU_12501 I 0.852
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.852
NECAME_00872 Necator americanus NECAME_00872 I 0.852
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.850
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.850
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.848
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.848
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.848
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.848
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.848
CJA13458 Caenorhabditis japonica CJA13458 I 0.848
CRE03310 Caenorhabditis remanei CRE03310 I 0.848
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.848
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.848
CBG01866 Caenorhabditis briggsae CBG01866 I 0.848
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.848
CBN19235 Caenorhabditis brenneri CBN19235 I 0.848
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.846
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.845
L889_g29879 Steinernema feltiae L889_g29879 I 0.845
L898_g2764 Steinernema monticolum L898_g2764 I 0.845
L893_g3010 Steinernema glaseri L893_g3010 I 0.845
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.843
Bm5319 Brugia malayi Bm5319 I 0.843
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.843
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.843
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.843
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.843
LOAG_00300 Loa loa LOAG_00300 I 0.843
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.841
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.841
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.838
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.837
CJA14829 Caenorhabditis japonica CJA14829 I 0.835
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.834
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.834
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.834
L889_g7780 Steinernema feltiae L889_g7780 I 0.831
L892_g8671 Steinernema scapterisci L892_g8671 I 0.831
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.831
CRE25378 Caenorhabditis remanei CRE25378 I 0.831
L898_g22454 Steinernema monticolum L898_g22454 I 0.831
CBN20518 Caenorhabditis brenneri CBN20518 I 0.829
CBG16594 Caenorhabditis briggsae CBG16594 I 0.829
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.827
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.827
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.822
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.821
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.819
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.819
LOAG_08636 Loa loa LOAG_08636 I 0.819
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.819
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.811
CBN19664 Caenorhabditis brenneri CBN19664 N 0.807
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.807
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.806
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.802
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.802
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.802
ASU_13587 Ascaris suum ASU_13587 I 0.800
CBG09380 Caenorhabditis briggsae CBG09380 I 0.795
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.795
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.794
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.792
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.791
CBN28056 Caenorhabditis brenneri CBN28056 I 0.788
CBN23409 Caenorhabditis brenneri CBN23409 I 0.788
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.787
ASU_10584 Ascaris suum ASU_10584 I 0.786
L892_g5079 Steinernema scapterisci L892_g5079 I 0.786
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.786
L893_g15276 Steinernema glaseri L893_g15276 I 0.786
L889_g22901 Steinernema feltiae L889_g22901 I 0.786
L898_g8573 Steinernema monticolum L898_g8573 I 0.786
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.785
CBG26996 Caenorhabditis briggsae CBG26996 I 0.785
ASU_02770 Ascaris suum ASU_02770 I 0.783
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.783
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.783
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.782
PPA16374 Pristionchus pacificus PPA16374 I 0.775
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.774
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.774
NECAME_11999 Necator americanus NECAME_11999 I 0.772
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.772
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.772
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.772
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.772
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.771
PPA22443 Pristionchus pacificus PPA22443 I 0.769
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.769
ASU_02757 Ascaris suum ASU_02757 N 0.769
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.769
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.768
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.768
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.768
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.768
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.768
PPA20196 Pristionchus pacificus PPA20196 I 0.767
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.767
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.766
CBG23381 Caenorhabditis briggsae CBG23381 I 0.764
CBG23380 Caenorhabditis briggsae CBG23380 D 0.764
CRE27050 Caenorhabditis remanei CRE27050 I 0.764
CBN28497 Caenorhabditis brenneri CBN28497 I 0.764
CRE26981 Caenorhabditis remanei CRE26981 I 0.764
CRE30787 Caenorhabditis remanei CRE30787 I 0.760
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.760
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.760
CBN28528 Caenorhabditis brenneri CBN28528 I 0.759
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.759
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.759
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.759
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I 0.759
CBN15481 Caenorhabditis brenneri CBN15481 I 0.759
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.755
L889_g22425 Steinernema feltiae L889_g22425 N 0.754
NECAME_01070 Necator americanus NECAME_01070 I 0.753
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.753
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.753
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.753
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.753
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.753
CBN28791 Caenorhabditis brenneri CBN28791 I 0.748
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.747
L892_g2422 Steinernema scapterisci L892_g2422 I 0.747
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.746