CJA14829 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA14829 T301975_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.973 0.743
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.972 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA14829 Nuclear receptor 42 116

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.973
CBG26996 Caenorhabditis briggsae CBG26996 I 0.972
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.972
CBN28056 Caenorhabditis brenneri CBN28056 I 0.967
CBN23409 Caenorhabditis brenneri CBN23409 I 0.967
CJA38253 Caenorhabditis japonica CJA38253 N 0.894
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.857
L889_g1891 Steinernema feltiae L889_g1891 I 0.850
CJA00680 Caenorhabditis japonica CJA00680 I 0.835
NECAME_08394 Necator americanus NECAME_08394 I 0.815
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.804
L893_g28857 Steinernema glaseri L893_g28857 I 0.804
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.802
PPA21777 Pristionchus pacificus PPA21777 I 0.798
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.793
PPA29597 Pristionchus pacificus PPA29597 I 0.792
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.792
L898_g9866 Steinernema monticolum L898_g9866 I 0.787
L889_g1557 Steinernema feltiae L889_g1557 I 0.787
CRE00606 Caenorhabditis remanei CRE00606 I 0.786
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.786
CBG10857 Caenorhabditis briggsae CBG10857 I 0.786
CBN24827 Caenorhabditis brenneri CBN24827 I 0.763
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.754
PPA06637 Pristionchus pacificus PPA06637 I 0.753
L892_g4169 Steinernema scapterisci L892_g4169 I 0.752
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.747
CJA08896 Caenorhabditis japonica CJA08896 I 0.747
CRE00149 Caenorhabditis remanei CRE00149 I 0.747
CBG10855 Caenorhabditis briggsae CBG10855 I 0.747