PPA24481 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA24481 T305926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.865 0.600
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.848 0.586
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.809 0.643
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.804 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA24481 Nuclear receptor 104 175

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.994
CBG10857 Caenorhabditis briggsae CBG10857 I 0.973
CJA00680 Caenorhabditis japonica CJA00680 I 0.973
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.973
CRE00606 Caenorhabditis remanei CRE00606 I 0.973
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.964
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.961
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.959
LOAG_16377 Loa loa LOAG_16377 I 0.959
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.958
L889_g1891 Steinernema feltiae L889_g1891 I 0.957
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.956
CBN24827 Caenorhabditis brenneri CBN24827 I 0.956
L892_g4169 Steinernema scapterisci L892_g4169 I 0.955
L893_g28857 Steinernema glaseri L893_g28857 I 0.955
CJA08896 Caenorhabditis japonica CJA08896 I 0.954
CBG10855 Caenorhabditis briggsae CBG10855 I 0.954
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.954
NECAME_01944 Necator americanus NECAME_01944 I 0.954
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.952
NECAME_08394 Necator americanus NECAME_08394 I 0.952
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.951
CRE00149 Caenorhabditis remanei CRE00149 I 0.951
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.951
PPA21777 Pristionchus pacificus PPA21777 I 0.948
L889_g1557 Steinernema feltiae L889_g1557 I 0.948
L898_g9866 Steinernema monticolum L898_g9866 I 0.948
PPA10975 Pristionchus pacificus PPA10975 N 0.947
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.945
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.945
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.945
ASU_03657 Ascaris suum ASU_03657 I 0.945
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.945
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.944
L893_g3565 Steinernema glaseri L893_g3565 I 0.942
L892_g17612 Steinernema scapterisci L892_g17612 I 0.941
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.937
PPA29597 Pristionchus pacificus PPA29597 I 0.931
PPA24468 Pristionchus pacificus PPA24468 I 0.931
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.931
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.927
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.921
PPA06637 Pristionchus pacificus PPA06637 I 0.901
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.898
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.895
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.892
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.889
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.887
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.883
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.883
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.883
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.878
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.877
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.875
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.875
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.872
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.872
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.872
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.870
CBN29725 Caenorhabditis brenneri CBN29725 I 0.868
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.868
CRE27053 Caenorhabditis remanei CRE27053 I 0.868
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.867
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.867
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.867
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.867
L893_g13285 Steinernema glaseri L893_g13285 I 0.866
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.866
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.866
L898_g26357 Steinernema monticolum L898_g26357 I 0.865
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.865
L889_g17247 Steinernema feltiae L889_g17247 I 0.865
CBG03844 Caenorhabditis briggsae CBG03844 I 0.865
CRE08259 Caenorhabditis remanei CRE08259 I 0.865
CBN18198 Caenorhabditis brenneri CBN18198 I 0.865
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.865
ASU_03870 Ascaris suum ASU_03870 I 0.865
CBN20749 Caenorhabditis brenneri CBN20749 I 0.865
LOAG_08615 Loa loa LOAG_08615 I 0.865
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.865
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.865
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.864
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.864
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.863
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.862
Bm4980 Brugia malayi Bm4980 I 0.862
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.860
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.859
CRE25378 Caenorhabditis remanei CRE25378 I 0.859
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.859
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.859
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.859
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.858
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.858
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.857
CBG16594 Caenorhabditis briggsae CBG16594 I 0.857
CBN20518 Caenorhabditis brenneri CBN20518 I 0.857
L893_g25227 Steinernema glaseri L893_g25227 I 0.857
NECAME_00872 Necator americanus NECAME_00872 I 0.856
ASU_12501 Ascaris suum ASU_12501 I 0.856
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.856
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.850
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.850
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.850
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.850
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.850
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.850
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.850
CJA13458 Caenorhabditis japonica CJA13458 I 0.848
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.848
CRE03310 Caenorhabditis remanei CRE03310 I 0.848
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.848
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.848
CBN19235 Caenorhabditis brenneri CBN19235 I 0.848
CBG01866 Caenorhabditis briggsae CBG01866 I 0.848
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.848
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.848
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.848
L893_g3010 Steinernema glaseri L893_g3010 I 0.845
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.845
L898_g2764 Steinernema monticolum L898_g2764 I 0.845
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.845
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.845
L889_g29879 Steinernema feltiae L889_g29879 I 0.845
L889_g7780 Steinernema feltiae L889_g7780 I 0.844
L892_g8671 Steinernema scapterisci L892_g8671 I 0.844
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.844
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.844
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.844
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.842
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.842
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.842
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.842
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.842
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.842
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.842
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.842
Bm5319 Brugia malayi Bm5319 I 0.842
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.842
LOAG_00300 Loa loa LOAG_00300 I 0.842
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.841
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.840
L898_g22454 Steinernema monticolum L898_g22454 I 0.840
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.838
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.837
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.834
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.833
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.833
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.833
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.828
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.822
CBG09380 Caenorhabditis briggsae CBG09380 I 0.817
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.816
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.816
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.816
CBN28497 Caenorhabditis brenneri CBN28497 I 0.809
CRE27050 Caenorhabditis remanei CRE27050 I 0.809
CBG23380 Caenorhabditis briggsae CBG23380 D 0.809
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.807
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.806
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.804
L889_g22425 Steinernema feltiae L889_g22425 N 0.803
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.790
PPA16374 Pristionchus pacificus PPA16374 I 0.790
L893_g22683 Steinernema glaseri L893_g22683 I 0.790
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.790
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.787
CJA01292 Caenorhabditis japonica CJA01292 I 0.786
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.786
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.786
CRE30787 Caenorhabditis remanei CRE30787 I 0.785
PPA20196 Pristionchus pacificus PPA20196 I 0.785
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.785
L889_g8914 Steinernema feltiae L889_g8914 I 0.785
CBN28791 Caenorhabditis brenneri CBN28791 I 0.784
CBN28528 Caenorhabditis brenneri CBN28528 I 0.784
CBN15481 Caenorhabditis brenneri CBN15481 I 0.784
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.782
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.781
CBG23381 Caenorhabditis briggsae CBG23381 I 0.781
CJA41479 Caenorhabditis japonica CJA41479 I 0.780
CRE26981 Caenorhabditis remanei CRE26981 I 0.778
CRE27052 Caenorhabditis remanei CRE27052 I 0.777
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.776
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.773
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.773
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.772
L892_g2422 Steinernema scapterisci L892_g2422 I 0.771
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.771
L893_g15045 Steinernema glaseri L893_g15045 I 0.770
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.768
Minc17538 Meloidogyne incognita Minc17538 I 0.768
Minc13747 Meloidogyne incognita Minc13747 I 0.768
L892_g5079 Steinernema scapterisci L892_g5079 I 0.767
L889_g22901 Steinernema feltiae L889_g22901 I 0.767
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.767
ASU_10584 Ascaris suum ASU_10584 I 0.767
L893_g15276 Steinernema glaseri L893_g15276 I 0.767
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.767
L898_g8573 Steinernema monticolum L898_g8573 I 0.767
L898_g30390 Steinernema monticolum L898_g30390 I 0.766
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.764
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.764
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.761
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.756
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.756
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.756
PPA27013 Pristionchus pacificus PPA27013 N 0.756
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.755
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.754
LOAG_08636 Loa loa LOAG_08636 I 0.754
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.754
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.754
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.754
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.753
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.751
CBG23319 Caenorhabditis briggsae CBG23319 I 0.747