nLs.2.1.2.g04051 (Litomosoides sigmodontis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nLs.2.1.2.g04051 T309832_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.906 0.571
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.820 0.500
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t04051-RA Nuclear receptor 21 90

Links

Other Nuclear receptor family TFs
Other Litomosoides sigmodontis TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.993
LOAG_08636 Loa loa LOAG_08636 I 0.993
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.993
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.993
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.992
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.992
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.991
ASU_13587 Ascaris suum ASU_13587 I 0.990
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.989
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.983
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.980
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.980
PPA22443 Pristionchus pacificus PPA22443 I 0.980
Minc17538 Meloidogyne incognita Minc17538 I 0.978
Minc13747 Meloidogyne incognita Minc13747 I 0.978
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.978
L893_g21283 Steinernema glaseri L893_g21283 I 0.974
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.974
L889_g11570 Steinernema feltiae L889_g11570 I 0.974
L898_g23058 Steinernema monticolum L898_g23058 I 0.974
L892_g4134 Steinernema scapterisci L892_g4134 I 0.974
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.972
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.972
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.965
CBN11572 Caenorhabditis brenneri CBN11572 I 0.965
CRE00809 Caenorhabditis remanei CRE00809 I 0.964
CJA16040 Caenorhabditis japonica CJA16040 I 0.964
CBG14485 Caenorhabditis briggsae CBG14485 I 0.964
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.910
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.910
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.910
WUBG_17449 Wuchereria bancrofti WUBG_17449 N 0.909
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.906
ASU_03870 Ascaris suum ASU_03870 I 0.906
CBG03844 Caenorhabditis briggsae CBG03844 I 0.906
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.906
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.906
CBN18198 Caenorhabditis brenneri CBN18198 I 0.906
CBN20749 Caenorhabditis brenneri CBN20749 I 0.906
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.906
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.906
CRE08259 Caenorhabditis remanei CRE08259 I 0.906
LOAG_08615 Loa loa LOAG_08615 I 0.905
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.903
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.903
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.903
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.903
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.903
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.903
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.902
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.902
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.902
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.901
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.901
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.898
L893_g13285 Steinernema glaseri L893_g13285 I 0.897
L889_g17247 Steinernema feltiae L889_g17247 I 0.896
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.896
L898_g26357 Steinernema monticolum L898_g26357 I 0.896
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.894
Bm4980 Brugia malayi Bm4980 I 0.894
ASIM_0001848201 Anisakis simplex ASIM_0001848201 N 0.889
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.884
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.882
NECAME_11999 Necator americanus NECAME_11999 I 0.879
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.877
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.877
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.877
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.875
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.874
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.873
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.872
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.872
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.872
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.872
nRc.2.0.1.g16639 Romanomermis culicivorax nRc.2.0.1.g16639 I 0.866
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.864
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.864
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.863
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.863
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.861
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.859
ASU_03657 Ascaris suum ASU_03657 I 0.859
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.855
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.852
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.847
CBN18824 Caenorhabditis brenneri CBN18824 I 0.845
CBN19472 Caenorhabditis brenneri CBN19472 I 0.845
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.842
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.842
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.840
L892_g1520 Steinernema scapterisci L892_g1520 I 0.839
L596_g11029 Steinernema carpocapsae L596_g11029 I 0.839
PPA06637 Pristionchus pacificus PPA06637 I 0.839
ASIM_0001423201 Anisakis simplex ASIM_0001423201 I 0.838
L893_g3010 Steinernema glaseri L893_g3010 I 0.837
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.837
L898_g2764 Steinernema monticolum L898_g2764 I 0.837
L889_g29879 Steinernema feltiae L889_g29879 I 0.837
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.837
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.837
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.837
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.837
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.837
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.837
LOAG_00300 Loa loa LOAG_00300 I 0.837
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.837
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.837
Bm5319 Brugia malayi Bm5319 I 0.837
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.837
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.833
ASU_00859 Ascaris suum ASU_00859 I 0.833
ALUE_0000387101 Ascaris lumbricoides ALUE_0000387101 I 0.833
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.833
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.832
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.830
CBG16594 Caenorhabditis briggsae CBG16594 I 0.830
CRE25378 Caenorhabditis remanei CRE25378 I 0.830
CBN20518 Caenorhabditis brenneri CBN20518 I 0.830
scaffold1039-EXSNAP2012.5 Pristionchus exspectatus scaffold1039-EXSNAP2012.5 I 0.829
L889_g17254 Steinernema feltiae L889_g17254 I 0.828
SMUV_0000369301 Syphacia muris SMUV_0000369301 I 0.828
CBG04204 Caenorhabditis briggsae CBG04204 I 0.828
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.828
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.828
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.828
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.825
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.825
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.825
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.825
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.825
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.825
L889_g1891 Steinernema feltiae L889_g1891 I 0.824
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.824
L893_g25227 Steinernema glaseri L893_g25227 I 0.824
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.824
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.823
ASU_12501 Ascaris suum ASU_12501 I 0.823
NECAME_00872 Necator americanus NECAME_00872 I 0.823
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I 0.822
CBG10857 Caenorhabditis briggsae CBG10857 I 0.821
CRE00606 Caenorhabditis remanei CRE00606 I 0.821
CJA00680 Caenorhabditis japonica CJA00680 I 0.821
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.821
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.820
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.820
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.820
CRE03310 Caenorhabditis remanei CRE03310 I 0.820
CBN19235 Caenorhabditis brenneri CBN19235 I 0.820
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.820
CBG01866 Caenorhabditis briggsae CBG01866 I 0.820
CJA13458 Caenorhabditis japonica CJA13458 I 0.820
L898_g7537 Steinernema monticolum L898_g7537 I 0.819
L898_g22454 Steinernema monticolum L898_g22454 I 0.819
Minc05752 Meloidogyne incognita Minc05752 I 0.817
Minc02318 Meloidogyne incognita Minc02318 I 0.817
EVEC_0001195701 Enterobius vermicularis EVEC_0001195701 I 0.815
L889_g7780 Steinernema feltiae L889_g7780 I 0.814
L892_g8671 Steinernema scapterisci L892_g8671 I 0.814
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.814
nhr-64 Caenorhabditis elegans WBGene00003654 I 0.813
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.812
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.812
SVE_0639400 Strongyloides venezuelensis SVE_0639400 I 0.811
SPAL_0001213800 Strongyloides papillosus SPAL_0001213800 I 0.811
L889_g1557 Steinernema feltiae L889_g1557 I 0.810
PPA29597 Pristionchus pacificus PPA29597 I 0.809
SBAD_0000391501 Soboliphyme baturini SBAD_0000391501 I 0.809
L898_g9866 Steinernema monticolum L898_g9866 I 0.808
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.807
CRE30089 Caenorhabditis remanei CRE30089 I 0.806
Minc11307 Meloidogyne incognita Minc11307 I 0.803
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.799
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.798
L893_g28857 Steinernema glaseri L893_g28857 I 0.798
L892_g4169 Steinernema scapterisci L892_g4169 I 0.798
PTRK_0000862000 Parastrongyloides trichosuri PTRK_0000862000 I 0.795
SSTP_0001140400 Strongyloides stercoralis SSTP_0001140400 I 0.795
L892_g1523 Steinernema scapterisci L892_g1523 I 0.795
L596_g11032 Steinernema carpocapsae L596_g11032 I 0.795
EFV54558 Trichinella spiralis EFV54558 I 0.794
D917_06779 Trichinella nativa D917_06779 I 0.794
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.792
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.789
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.789
nRc.2.0.1.g00257 Romanomermis culicivorax nRc.2.0.1.g00257 I 0.785
TMUE_s0002006800 Trichuris muris TMUE_s0002006800 I 0.781
CRE08089 Caenorhabditis remanei CRE08089 I 0.778
CBN14643 Caenorhabditis brenneri CBN14643 I 0.778
nhr-69 Caenorhabditis elegans WBGene00003659 I 0.778
L892_g17612 Steinernema scapterisci L892_g17612 I 0.778
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.778
CBG03848 Caenorhabditis briggsae CBG03848 I 0.778
CBN11344 Caenorhabditis brenneri CBN11344 I 0.778
NECAME_08394 Necator americanus NECAME_08394 I 0.777
CJA14599 Caenorhabditis japonica CJA14599 I 0.774
ENSLOCG00000013459 Lepisosteus oculatus ENSLOCG00000013459 I 0.772
EVEC_0000506001 Enterobius vermicularis EVEC_0000506001 N 0.772
L893_g3565 Steinernema glaseri L893_g3565 I 0.771
ANCCAN_07383 Ancylostoma caninum ANCCAN_07383 I 0.770
NECAME_12245 Necator americanus NECAME_12245 I 0.770
TELCIR_10098 Teladorsagia circumcincta TELCIR_10098 I 0.770
HCOI00106000 Haemonchus contortus HCOI00106000 I 0.770
NBR_0001253301 Nippostrongylus brasiliensis NBR_0001253301 I 0.770
HPBE_0000460501 Heligmosomoides bakeri HPBE_0000460501 I 0.770
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.762
CBG10855 Caenorhabditis briggsae CBG10855 I 0.762
CJA08896 Caenorhabditis japonica CJA08896 I 0.762
CBN24827 Caenorhabditis brenneri CBN24827 I 0.761
CGOC_0000474501 Cylicostephanus goldi CGOC_0000474501 N 0.760
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.759
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.758
CBN05776 Caenorhabditis brenneri CBN05776 I 0.758
CJA19445 Caenorhabditis japonica CJA19445 I 0.758
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.758
CRE00149 Caenorhabditis remanei CRE00149 I 0.758
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.758
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.758
CBG03860 Caenorhabditis briggsae CBG03860 I 0.758
CRE08264 Caenorhabditis remanei CRE08264 I 0.758
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.752
PPA24481 Pristionchus pacificus PPA24481 I 0.751
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.751
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.749
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.748
PPA21777 Pristionchus pacificus PPA21777 I 0.747
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.746
BXY_1057700 Bursaphelenchus xylophilus BXY_1057700 I 0.746
LOAG_16377 Loa loa LOAG_16377 I 0.746