nhr-62 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003652 T306176_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN

NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.924 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Y67A6A.2a Nuclear receptor 96 165

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBN05776 Caenorhabditis brenneri CBN05776 I 0.995
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.995
CJA19445 Caenorhabditis japonica CJA19445 I 0.995
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.995
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.995
CRE08264 Caenorhabditis remanei CRE08264 I 0.995
CBG03860 Caenorhabditis briggsae CBG03860 I 0.995
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.995
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.994
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.988
L892_g17832 Steinernema scapterisci L892_g17832 I 0.988
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.987
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.986
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.985
CJA14611 Caenorhabditis japonica CJA14611 I 0.985
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.985
CBG03466 Caenorhabditis briggsae CBG03466 I 0.985
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.985
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.985
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.985
CBN28641 Caenorhabditis brenneri CBN28641 I 0.985
CRE29874 Caenorhabditis remanei CRE29874 I 0.985
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.985
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.985
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.984
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.982
L898_g5338 Steinernema monticolum L898_g5338 I 0.982
L893_g6565 Steinernema glaseri L893_g6565 I 0.982
L889_g16305 Steinernema feltiae L889_g16305 I 0.982
L892_g17146 Steinernema scapterisci L892_g17146 I 0.982
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.981
L893_g5404 Steinernema glaseri L893_g5404 I 0.980
L889_g366 Steinernema feltiae L889_g366 I 0.980
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.978
CRE22212 Caenorhabditis remanei CRE22212 I 0.976
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.968
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.958
L892_g3438 Steinernema scapterisci L892_g3438 I 0.957
L898_g9613 Steinernema monticolum L898_g9613 I 0.954
L893_g33656 Steinernema glaseri L893_g33656 I 0.953
L889_g15424 Steinernema feltiae L889_g15424 I 0.953
CJA02727 Caenorhabditis japonica CJA02727 I 0.951
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.950
CBN04415 Caenorhabditis brenneri CBN04415 I 0.950
CBG13142 Caenorhabditis briggsae CBG13142 I 0.950
CRE26423 Caenorhabditis remanei CRE26423 I 0.950
CBN32300 Caenorhabditis brenneri CBN32300 I 0.950
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.950
PPA14696 Pristionchus pacificus PPA14696 I 0.947
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.944
RSKR_0000426600 Rhabditophanes kr3021 RSKR_0000426600 N 0.943
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.933
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N 0.931
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.927
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.927
ASU_00971 Ascaris suum ASU_00971 I 0.927
CRE10779 Caenorhabditis remanei CRE10779 I 0.926
CBG22587 Caenorhabditis briggsae CBG22587 I 0.926
CRE07033 Caenorhabditis remanei CRE07033 I 0.926
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.924
NECAME_11708 Necator americanus NECAME_11708 N 0.923
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.921
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.920
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.920
NECAME_02375 Necator americanus NECAME_02375 I 0.920
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.920
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.920
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.920
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.920
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.919
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.919
CJA14248 Caenorhabditis japonica CJA14248 I 0.919
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.919
ACAC_0000445401 Angiostrongylus cantonensis ACAC_0000445401 N 0.918
TELCIR_16512 Teladorsagia circumcincta TELCIR_16512 N 0.918
CJA06107 Caenorhabditis japonica CJA06107 I 0.917
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.917
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.917
L889_g31970 Steinernema feltiae L889_g31970 I 0.917
L893_g263 Steinernema glaseri L893_g263 I 0.917
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.917
L898_g11608 Steinernema monticolum L898_g11608 I 0.917
CBG04240 Caenorhabditis briggsae CBG04240 I 0.913
CRE24933 Caenorhabditis remanei CRE24933 I 0.905
L889_g25097 Steinernema feltiae L889_g25097 I 0.899
L892_g186 Steinernema scapterisci L892_g186 I 0.899
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.899
L898_g18440 Steinernema monticolum L898_g18440 I 0.899
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.899
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.899
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.899
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.899
CRE21925 Caenorhabditis remanei CRE21925 I 0.899
LOAG_07549 Loa loa LOAG_07549 I 0.899
CJA14035 Caenorhabditis japonica CJA14035 I 0.899
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.899
CBG22776 Caenorhabditis briggsae CBG22776 I 0.899
CBN08474 Caenorhabditis brenneri CBN08474 I 0.899
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.899
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.899
Bm5457 Brugia malayi Bm5457 I 0.899
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.899
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.899
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.899
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.899
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.899
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.898
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.897
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.897
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.897
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.897
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.896
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.896
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.895
CRE09416 Caenorhabditis remanei CRE09416 I 0.894
CBG14996 Caenorhabditis briggsae CBG14996 I 0.892
L893_g6023 Steinernema glaseri L893_g6023 I 0.891
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.889
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.888
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.878
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.877
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.876
Minc11307 Meloidogyne incognita Minc11307 I 0.873
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.867
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.863
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.859
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.859
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.859
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.859
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.859
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.841
CRE07035 Caenorhabditis remanei CRE07035 I 0.841
CJA39530 Caenorhabditis japonica CJA39530 I 0.816
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.813
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.813
CBN00088 Caenorhabditis brenneri CBN00088 I 0.812
CBN21958 Caenorhabditis brenneri CBN21958 I 0.812
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.801
CBG14997 Caenorhabditis briggsae CBG14997 I 0.799
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.791
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.785
ASU_13587 Ascaris suum ASU_13587 I 0.780
CJA18307 Caenorhabditis japonica CJA18307 I 0.778
CRE07034 Caenorhabditis remanei CRE07034 I 0.771
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.758
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.757
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.757
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.749
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.749
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.749
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.749
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.749
LOAG_08636 Loa loa LOAG_08636 I 0.749