Ppa-nhr-120 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA00183 T305819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.880 0.614
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.796 0.586
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.794 0.600
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.793 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA00183 Nuclear receptor 43 112

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.992
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.992
L892_g17612 Steinernema scapterisci L892_g17612 I 0.976
L893_g3565 Steinernema glaseri L893_g3565 I 0.976
L892_g4169 Steinernema scapterisci L892_g4169 I 0.975
CRE00149 Caenorhabditis remanei CRE00149 I 0.972
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.970
CBN24827 Caenorhabditis brenneri CBN24827 I 0.969
CBG10855 Caenorhabditis briggsae CBG10855 I 0.969
CJA08896 Caenorhabditis japonica CJA08896 I 0.969
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.969
L893_g28857 Steinernema glaseri L893_g28857 I 0.966
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.964
L889_g1557 Steinernema feltiae L889_g1557 I 0.963
L898_g9866 Steinernema monticolum L898_g9866 I 0.963
L889_g1891 Steinernema feltiae L889_g1891 I 0.962
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.961
NECAME_08394 Necator americanus NECAME_08394 I 0.960
CBG10857 Caenorhabditis briggsae CBG10857 I 0.959
CRE00606 Caenorhabditis remanei CRE00606 I 0.959
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.959
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.955
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.955
NECAME_01944 Necator americanus NECAME_01944 I 0.955
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.953
PPA21777 Pristionchus pacificus PPA21777 I 0.949
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.947
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.947
CJA00680 Caenorhabditis japonica CJA00680 I 0.945
ASU_03657 Ascaris suum ASU_03657 I 0.942
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.942
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.932
LOAG_16377 Loa loa LOAG_16377 I 0.932
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.931
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.930
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.927
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.926
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.921
L893_g13285 Steinernema glaseri L893_g13285 I 0.911
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.910
L889_g17247 Steinernema feltiae L889_g17247 I 0.910
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.910
L898_g26357 Steinernema monticolum L898_g26357 I 0.910
PPA29597 Pristionchus pacificus PPA29597 I 0.897
CRE26981 Caenorhabditis remanei CRE26981 I 0.893
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.888
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.887
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.884
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.883
PPA24481 Pristionchus pacificus PPA24481 I 0.883
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.883
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.882
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.881
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.881
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.881
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.881
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.881
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.880
CRE08259 Caenorhabditis remanei CRE08259 I 0.880
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.880
ASU_03870 Ascaris suum ASU_03870 I 0.880
LOAG_08615 Loa loa LOAG_08615 I 0.880
CBG03844 Caenorhabditis briggsae CBG03844 I 0.880
CBN18198 Caenorhabditis brenneri CBN18198 I 0.880
CBN20749 Caenorhabditis brenneri CBN20749 I 0.880
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.875
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.874
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.874
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.874
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.874
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.874
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.874
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.874
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.874
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.874
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.871
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.869
CBG23318 Caenorhabditis briggsae CBG23318 I 0.868
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.868
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.867
Bm4980 Brugia malayi Bm4980 I 0.867
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.867
CRE26982 Caenorhabditis remanei CRE26982 I 0.866
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.865
CBG23319 Caenorhabditis briggsae CBG23319 I 0.864
PPA06637 Pristionchus pacificus PPA06637 I 0.863
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.859
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.859
CBN30215 Caenorhabditis brenneri CBN30215 I 0.858
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.856
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.856
L889_g22425 Steinernema feltiae L889_g22425 N 0.856
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.856
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.856
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.856
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.854
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.851
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.851
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.851
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.851
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.850
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.850
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.850
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.850
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.847
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.847
CJA01292 Caenorhabditis japonica CJA01292 I 0.846
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.843
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.839
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.839
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.839
L892_g2422 Steinernema scapterisci L892_g2422 I 0.839
ASU_02770 Ascaris suum ASU_02770 I 0.838
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.838
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.838
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.838
ALUE_0001920701 Ascaris lumbricoides ALUE_0001920701 N 0.836
CJA37776 Caenorhabditis japonica CJA37776 I 0.836
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.830
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.824
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.824
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.820
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.816
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.815
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.815
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.813
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.813
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.813
Bm5520 Brugia malayi Bm5520 I 0.813
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.813
LOAG_03407 Loa loa LOAG_03407 I 0.813
L898_g30390 Steinernema monticolum L898_g30390 I 0.813
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.813
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.813
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.813
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.813
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.813
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.813
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.811
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.811
L893_g22683 Steinernema glaseri L893_g22683 I 0.808
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.808
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.808
L893_g25227 Steinernema glaseri L893_g25227 I 0.806
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.806
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.806
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.806
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.805
NECAME_00872 Necator americanus NECAME_00872 I 0.805
ASU_12501 Ascaris suum ASU_12501 I 0.805
L889_g8914 Steinernema feltiae L889_g8914 I 0.804
CBG02077 Caenorhabditis briggsae CBG02077 I 0.803
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.803
L596_g702 Steinernema carpocapsae L596_g702 I 0.803
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.803
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.803
CBN21115 Caenorhabditis brenneri CBN21115 I 0.803
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.803
CRE07549 Caenorhabditis remanei CRE07549 I 0.803
L892_g5067 Steinernema scapterisci L892_g5067 I 0.803
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.802
GPLIN_000694800 Globodera pallida GPLIN_000694800 N 0.799
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.798
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.797
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.797
NECAME_01070 Necator americanus NECAME_01070 I 0.797
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.797
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.797
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.797
CBN19235 Caenorhabditis brenneri CBN19235 I 0.796
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.796
CJA13458 Caenorhabditis japonica CJA13458 I 0.796
CRE03310 Caenorhabditis remanei CRE03310 I 0.796
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.796
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.796
CBG01866 Caenorhabditis briggsae CBG01866 I 0.796
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.796
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.795
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.795
CRE27050 Caenorhabditis remanei CRE27050 I 0.794
CBN28497 Caenorhabditis brenneri CBN28497 I 0.794
CBG23380 Caenorhabditis briggsae CBG23380 D 0.794
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.793
CBG09380 Caenorhabditis briggsae CBG09380 I 0.793
L889_g29879 Steinernema feltiae L889_g29879 I 0.792
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.792
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.792
L898_g2764 Steinernema monticolum L898_g2764 I 0.792
PPA16374 Pristionchus pacificus PPA16374 I 0.792
L893_g3010 Steinernema glaseri L893_g3010 I 0.792
Bm5319 Brugia malayi Bm5319 I 0.789
LOAG_00300 Loa loa LOAG_00300 I 0.789
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.789
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.789
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.789
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.789
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.789
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.789
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.788
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.788
nhr-40 Caenorhabditis elegans WBGene00003630 I 0.785
PPA20196 Pristionchus pacificus PPA20196 I 0.785
CBN07240 Caenorhabditis brenneri CBN07240 I 0.785
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.785
CBG00093 Caenorhabditis briggsae CBG00093 I 0.784
CJA06153 Caenorhabditis japonica CJA06153 I 0.784
CRE24074 Caenorhabditis remanei CRE24074 I 0.784
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.784
L893_g15045 Steinernema glaseri L893_g15045 I 0.783
CJA41479 Caenorhabditis japonica CJA41479 I 0.781
CRE25378 Caenorhabditis remanei CRE25378 I 0.780
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.779
CBG16594 Caenorhabditis briggsae CBG16594 I 0.777
CBN20518 Caenorhabditis brenneri CBN20518 I 0.777
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.775
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.770
NECAME_06702 Necator americanus NECAME_06702 I 0.764
L889_g7780 Steinernema feltiae L889_g7780 I 0.760
L898_g22454 Steinernema monticolum L898_g22454 I 0.760
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.760
L892_g8671 Steinernema scapterisci L892_g8671 I 0.760
PPA10975 Pristionchus pacificus PPA10975 N 0.760
ASIM_0001238601 Anisakis simplex ASIM_0001238601 N 0.757
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.756
L889_g22901 Steinernema feltiae L889_g22901 I 0.756
L893_g15276 Steinernema glaseri L893_g15276 I 0.756
L892_g5079 Steinernema scapterisci L892_g5079 I 0.756
L898_g8573 Steinernema monticolum L898_g8573 I 0.756
ASU_10584 Ascaris suum ASU_10584 I 0.756
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.756
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.753
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.753
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.753
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.751
CBG23381 Caenorhabditis briggsae CBG23381 I 0.748