nhr-5 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003604 T306129_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-5
M00688_2.00		 Caenorhabditis elegans
NNRWGTACRSNN
NNSYGTACWYNN		 PBM
Narasimhan et al.(2015)
pTH10042		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00688_2.00 Nuclear receptor 41 110

DNA Binding Domains

Protein ID Domain From To Sequence
Y73F8A.21a Nuclear receptor 41 110
Y73F8A.21c Nuclear receptor 41 110

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE20968 Caenorhabditis remanei CRE20968 I 0.976
CRE15100 Caenorhabditis remanei CRE15100 I 0.976
CBN16692 Caenorhabditis brenneri CBN16692 I 0.976
CBG13722 Caenorhabditis briggsae CBG13722 I 0.971
HCOI00626200 Haemonchus contortus HCOI00626200 I 0.942
ANCCEY_03917 Ancylostoma ceylanicum ANCCEY_03917 I 0.942
NECAME_16756 Necator americanus NECAME_16756 I 0.942
Hba_07236 Heterorhabditis bacteriophora Hba_07236 I 0.745