CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ASU_08827
(
Ascaris suum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ASU_08827
T308167_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_08827
Nuclear receptor
114
180
KICRVCGDKAYSYNFNVITCESCKAFFRRNANKDKVGMKKEWIMSDEARIEKKQRVQENRERRLAEV
Links
Other
Nuclear receptor
family TFs
Other
Ascaris suum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPUH_0001346001
Gongylonema pulchrum
GPUH_0001346001
N
0.934
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.869
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.869
Minc18589
Meloidogyne incognita
Minc18589
I
0.869
Minc13296
Meloidogyne incognita
Minc13296
I
0.869
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
0.851
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
0.851
augustus_masked-nMf.1.1.scaf52497-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf52497-processed-gene-0.0
N
0.772
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.758
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.758
CJA03214
Caenorhabditis japonica
CJA03214
I
0.758
CRE19106
Caenorhabditis remanei
CRE19106
I
0.758
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.758