PTRK_0000497300 (Parastrongyloides trichosuri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PTRK_0000497300 T310008_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.967 0.800
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.752 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0000497300.1 Nuclear receptor 24 94

Links

Other Nuclear receptor family TFs
Other Parastrongyloides trichosuri TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.988
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.988
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.988
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.986
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.983
L889_g5777 Steinernema feltiae L889_g5777 I 0.982
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.982
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.980
L898_g24498 Steinernema monticolum L898_g24498 I 0.980
L893_g29388 Steinernema glaseri L893_g29388 I 0.980
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.977
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.975
CBN26258 Caenorhabditis brenneri CBN26258 I 0.972
CBN18797 Caenorhabditis brenneri CBN18797 I 0.972
CBG06052 Caenorhabditis briggsae CBG06052 I 0.967
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.967
CRE12779 Caenorhabditis remanei CRE12779 I 0.966
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.956
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.945
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.945
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.945
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.945
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.941
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.941
ASU_01199 Ascaris suum ASU_01199 I 0.938
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.930
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.925
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.925
CBG19594 Caenorhabditis briggsae CBG19594 I 0.914
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.914
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.914
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.914
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.914
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.914
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.914
NECAME_12696 Necator americanus NECAME_12696 I 0.914
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.914
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.914
CRE06661 Caenorhabditis remanei CRE06661 I 0.914
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.914
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.914
CBN31048 Caenorhabditis brenneri CBN31048 I 0.914
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.914
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.911
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.905
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.890
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.889
L889_g8361 Steinernema feltiae L889_g8361 I 0.886
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.885
L898_g10316 Steinernema monticolum L898_g10316 I 0.885
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I 0.875
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.872
L898_g23965 Steinernema monticolum L898_g23965 I 0.869
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.867
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.867
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.867
L889_g6303 Steinernema feltiae L889_g6303 I 0.867
L893_g27196 Steinernema glaseri L893_g27196 I 0.867
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.864
L892_g21738 Steinernema scapterisci L892_g21738 I 0.859
NBR_0001013301 Nippostrongylus brasiliensis NBR_0001013301 I 0.855
ASU_04305 Ascaris suum ASU_04305 I 0.850
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.850
LOAG_01074 Loa loa LOAG_01074 I 0.850
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.850
Bm2389 Brugia malayi Bm2389 I 0.850
RSKR_0000811500 Rhabditophanes kr3021 RSKR_0000811500 I 0.849
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.847
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.846
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.841
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.839
CRE10161 Caenorhabditis remanei CRE10161 I 0.839
CJA08328 Caenorhabditis japonica CJA08328 I 0.839
CRE02711 Caenorhabditis remanei CRE02711 I 0.839
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.834
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.834
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.834
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.834
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.834
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.834
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.834
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.827
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.825
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.824
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.824
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.824
L893_g32432 Steinernema glaseri L893_g32432 I 0.819
CBG17744 Caenorhabditis briggsae CBG17744 I 0.813
CBN13729 Caenorhabditis brenneri CBN13729 I 0.805
L893_g27201 Steinernema glaseri L893_g27201 I 0.795
L889_g8621 Steinernema feltiae L889_g8621 I 0.795
L898_g2799 Steinernema monticolum L898_g2799 I 0.795
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.795
PPA21285 Pristionchus pacificus PPA21285 I 0.793
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.793
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.791
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.787
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.772
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.766
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.766
L893_g6878 Steinernema glaseri L893_g6878 I 0.765
CBN19233 Caenorhabditis brenneri CBN19233 I 0.753
CBG07552 Caenorhabditis briggsae CBG07552 I 0.752
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.752
CRE15289 Caenorhabditis remanei CRE15289 I 0.752
CJA04720 Caenorhabditis japonica CJA04720 I 0.749
CBG19604 Caenorhabditis briggsae CBG19604 I 0.749
PPA20304 Pristionchus pacificus PPA20304 I 0.747
CBN20828 Caenorhabditis brenneri CBN20828 I 0.745
CRE06667 Caenorhabditis remanei CRE06667 I 0.745
CBN07936 Caenorhabditis brenneri CBN07936 I 0.745
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.745
TCNE_0001063401 Toxocara canis TCNE_0001063401 N 0.745