TP53 (Sus scrofa)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSSSCG00000017950 T311150_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.923 0.923
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.923 0.923
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.923 0.923
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.923 0.923
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.923 0.923
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.923 0.923
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.923 0.923
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.923 0.923
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.923 0.923
Trp53
M03439_2.00 		Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT		 SELEX
Jolma et al.(2013)
Tp53_1 		0.862 0.862
Trp53
M03440_2.00 		Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT		 SELEX
Jolma et al.(2013)
Tp53_2 		0.862 0.862
Trp53
M03441_2.00 		Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY		 SELEX
Jolma et al.(2013)
Tp53_3 		0.862 0.862
Trp53
M09340_2.00 		Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY		 Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A 		0.862 0.862
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000019016 p53 87 282
ENSSSCP00000020919 p53 82 277

Links

Other p53 family TFs
Other Sus scrofa TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.964
TP53 Homo sapiens ENSG00000141510 D 0.938
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.934
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.929
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.929
TP53 Bos taurus ENSBTAG00000001069 I 0.929
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I 0.929
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.928
TP53 Pan troglodytes ENSPTRG00000008703 I 0.923
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.923
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.918
TP53 Macaca mulatta ENSMMUG00000008639 I 0.918
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.918
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.918
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I 0.916
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.913
TP53 Canis familiaris ENSCAFG00000016714 I 0.913
TP53 Felis catus ENSFCAG00000009623 I 0.913
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.913
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.908
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.898
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.898
ENSNLEG00000009730 Nomascus leucogenys ENSNLEG00000009730 I 0.897
TP53 Sorex araneus ENSSARG00000006206 I 0.893
TP53 Microcebus murinus ENSMICG00000014853 I 0.892
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.892
TP53 Ochotona princeps ENSOPRG00000006441 I 0.887
TP53 Cavia porcellus ENSCPOG00000014252 I 0.882
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.882
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.878
Trp53 Mus musculus ENSMUSG00000059552 D 0.867
TP53 Procavia capensis ENSPCAG00000012725 I 0.867
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I 0.867
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.856
ENSETEG00000008987 Echinops telfairi ENSETEG00000008987 I 0.844
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.842
ENSOCUG00000022109 Oryctolagus cuniculus ENSOCUG00000022109 I 0.842
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.842
TP53 Equus caballus ENSECAG00000008126 I 0.811
ENSMLUG00000025140 Myotis lucifugus ENSMLUG00000025140 I 0.809
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I 0.755
ENSACAG00000022533 Anolis carolinensis ENSACAG00000022533 I 0.754
ENSLAFG00000030880 Loxodonta africana ENSLAFG00000030880 I 0.751
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I 0.740
ENSLAFG00000032042 Loxodonta africana ENSLAFG00000032042 I 0.740
ENSLAFG00000028299 Loxodonta africana ENSLAFG00000028299 I 0.729
ENSLAFG00000030555 Loxodonta africana ENSLAFG00000030555 I 0.723
tp53 Danio rerio ENSDARG00000035559 I 0.718
Pvit_02042 Pogona vitticeps Pvit_02042 N 0.718
ENSLOCG00000013832 Lepisosteus oculatus ENSLOCG00000013832 N 0.714
Alligator_sinensis_CCG007355.2 Alligator sinensis Alligator_sinensis_CCG007355.2 N 0.709
ENSLACG00000014014 Latimeria chalumnae ENSLACG00000014014 N 0.704
ENSLAFG00000027474 Loxodonta africana ENSLAFG00000027474 I 0.701
ENSLAFG00000027365 Loxodonta africana ENSLAFG00000027365 I 0.701