CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACEP22879
(
Atta cephalotes
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
ACEP22879
T313062_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00
Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH9266
0.872
0.872
Eip93F
M06443_2.00
Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB
B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948
0.846
0.846
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP22879-PA
Pipsqueak
349
387
DRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEDQKQP
Links
Other
Pipsqueak
family TFs
Other
Atta cephalotes
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hsal_07289--NP_001011629.1_APIME
Harpegnathos saltator
Hsal_07289--NP_001011629.1_APIME
I
0.872
nasonia_NCBI_hmm1312624
Nasonia vitripennis
nasonia_NCBI_hmm1312624
D
0.872