CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsal_07289--NP_001011629.1_APIME
(
Harpegnathos saltator
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Hsal_07289--NP_001011629.1_APIME
T314446_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00
Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH9266
1.000
1.000
Eip93F
M06443_2.00
Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB
B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948
0.978
0.978
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_07289--NP_001011629.1_APIME
Pipsqueak
69
114
DRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Harpegnathos saltator
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nasonia_NCBI_hmm1312624
Nasonia vitripennis
nasonia_NCBI_hmm1312624
D
1.000
AMEC013272
Anopheles melas
AMEC013272
I
0.978
GE10258
Drosophila yakuba
FBgn0228131
I
0.978
Eip93F
Drosophila melanogaster
FBgn0264490
D
0.978
GD20912
Drosophila simulans
FBgn0192370
I
0.978
GM26391
Drosophila sechellia
FBgn0181244
I
0.978
ACEP22879
Atta cephalotes
ACEP22879
I
0.872
NBR_0000704901
Nippostrongylus brasiliensis
NBR_0000704901
I
0.862
HPBE_0000827001
Heligmosomoides bakeri
HPBE_0000827001
I
0.862
ACAC_0000538501
Angiostrongylus cantonensis
ACAC_0000538501
I
0.862
ASIM_0001367501
Anisakis simplex
ASIM_0001367501
I
0.862
nRc.2.0.1.g42873
Romanomermis culicivorax
nRc.2.0.1.g42873
I
0.824
OESDEN_18130
Oesophagostomum dentatum
OESDEN_18130
I
0.795
OESDEN_18004
Oesophagostomum dentatum
OESDEN_18004
I
0.795
ANCDUO_12248
Ancylostoma duodenale
ANCDUO_12248
I
0.795
DICVIV_12442
Dictyocaulus viviparus
DICVIV_12442
I
0.795