CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsal_07289--NP_001011629.1_APIME
(
Harpegnathos saltator
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
Hsal_07289--NP_001011629.1_APIME
T314446_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00
Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN
PBM
Weirauch et al.(2014)
pTH9266
1.000
1.000
Eip93F
M06443_2.00
Drosophila melanogaster
VCHSCCRAAAWT
AWTTTYGGSDGB
B1H
Zhu et al.(2011)
Eip93F_SANGER_10_FBgn0013948
0.978
0.978
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_07289--NP_001011629.1_APIME
Pipsqueak
69
114
DRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Harpegnathos saltator
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy