L892_g27509 (Steinernema scapterisci)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 L892_g27509 T315064_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g27509.t1 Pipsqueak 382 426
L892_g27509.t1 Pipsqueak 552 595

Links

Other Pipsqueak family TFs
Other Steinernema scapterisci TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L893_g31084 Steinernema glaseri L893_g31084 N 0.988
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.988
L898_g31322 Steinernema monticolum L898_g31322 N 0.977
L889_g3580 Steinernema feltiae L889_g3580 N 0.954
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.847
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.835
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.826
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.814
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.810
D918_09847 Trichuris suis D918_09847 N 0.810
EFV59144 Trichinella spiralis EFV59144 N 0.807
D917_10060 Trichinella nativa D917_10060 N 0.807
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.805
ASU_08146 Ascaris suum ASU_08146 N 0.805
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.805
TMUE_s0104004300 Trichuris muris TMUE_s0104004300 N 0.798
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.793
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.793
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.791
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.791
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.788
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.788
LOAG_18975 Loa loa LOAG_18975 N 0.786
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.782
CJA11562 Caenorhabditis japonica CJA11562 N 0.782
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.782
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.782
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.782
Bm5461 Brugia malayi Bm5461 N 0.782
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.782
SMUV_0000352701 Syphacia muris SMUV_0000352701 N 0.782