CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.E00457
(
Eucalyptus grandis
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Eucgr.E00457
T316020_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.E00457.1
PLATZ
18
89
RRYVYHDVIRLGDAQKLLDCSLVQPYTTNSAKVVFLNQRPMSRPFRGSGNFCITCDRSLQDGFHFCSLSCKV
Links
Other
PLATZ
family TFs
Other
Eucalyptus grandis
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_016018
Theobroma cacao
TCM_016018
N
0.889
VIT_02s0154g00150
Vitis vinifera
VIT_02s0154g00150
N
0.875
VIT_00s0233g00100
Vitis vinifera
VIT_00s0233g00100
N
0.847
Gorai.008G237000
Gossypium raimondii
Gorai.008G237000
N
0.847
GLYMA01G17580
Glycine max
GLYMA01G17580
N
0.833
evm.TU.supercontig_29.132
Carica papaya
evm.TU.supercontig_29.132
N
0.833
Gorai.003G169800
Gossypium raimondii
Gorai.003G169800
N
0.833
GLYMA11G17770
Glycine max
GLYMA11G17770
N
0.819
cassava17724.valid.m1
Manihot esculenta
cassava17724.valid.m1
N
0.819
Solyc01g091000.2
Solanum lycopersicum
Solyc01g091000.2
N
0.806
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
0.806
AMTR_s00059p00116150
Amborella trichopoda
AMTR_s00059p00116150
N
0.806
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N
0.806
TCM_005554
Theobroma cacao
TCM_005554
N
0.778
30174.m008836
Ricinus communis
30174.m008836
N
0.778
PK01122.1
Cannabis sativa
PK01122.1
N
0.778
Gorai.004G163500
Gossypium raimondii
Gorai.004G163500
N
0.764
Si018139m.g
Setaria italica
Si018139m.g
N
0.764
SapurV1A.0104s0310
Salix purpurea
SapurV1A.0104s0310
N
0.764
Gorai.007G089600
Gossypium raimondii
Gorai.007G089600
N
0.764
PDK_20s1530701g001
Phoenix dactylifera
PDK_20s1530701g001
N
0.764
orange1.1g035685m.g
Citrus sinensis
orange1.1g035685m.g
N
0.764
POPTR_0003s07310
Populus trichocarpa
POPTR_0003s07310
N
0.764
Sb04g004830
Sorghum bicolor
Sb04g004830
N
0.764
GSMUA_Achr8G33510_001
Musa acuminata
GSMUA_Achr8G33510_001
N
0.764
GSMUA_Achr7G03600_001
Musa acuminata
GSMUA_Achr7G03600_001
N
0.764
GRMZM2G017882
Zea mays
GRMZM2G017882
N
0.764
Pavir.Aa03378
Panicum virgatum
Pavir.Aa03378
N
0.764
evm.TU.supercontig_145.1
Carica papaya
evm.TU.supercontig_145.1
N
0.764
Pavir.Ab00578
Panicum virgatum
Pavir.Ab00578
N
0.764
OS02G0172800
Oryza sativa
OS02G0172800
N
0.750
ORUFI02G05620
Oryza rufipogon
ORUFI02G05620
N
0.750
POPTR_0001s15920
Populus trichocarpa
POPTR_0001s15920
N
0.750
ONIVA02G05860
Oryza nivara
ONIVA02G05860
N
0.750
29417.m000034
Ricinus communis
29417.m000034
N
0.750
Cla006768
Citrullus lanatus
Cla006768
N
0.750
Cucsa.120560
Cucumis sativus
Cucsa.120560
N
0.750
TRIUR3_33737
Triticum urartu
TRIUR3_33737
N
0.750
OPUNC02G04680
Oryza punctata
OPUNC02G04680
N
0.750
SapurV1A.0210s0200
Salix purpurea
SapurV1A.0210s0200
N
0.750
OB02G14750
Oryza brachyantha
OB02G14750
N
0.750
PK19037.1
Cannabis sativa
PK19037.1
N
0.750
GSMUA_AchrUn_randomG23740_001
Musa acuminata
GSMUA_AchrUn_randomG23740_001
N
0.750
GSMUA_Achr6G20140_001
Musa acuminata
GSMUA_Achr6G20140_001
N
0.750
GSMUA_Achr11G04210_001
Musa acuminata
GSMUA_Achr11G04210_001
N
0.750
GLYMA09G05781
Glycine max
GLYMA09G05781
N
0.750
OGLUM02G05380
Oryza glumaepatula
OGLUM02G05380
N
0.750
OBART02G05520
Oryza barthii
OBART02G05520
N
0.750
BGIOSGA007635
Oryza indica
BGIOSGA007635
N
0.750
LjSGA_033751.1
Lotus japonicus
LjSGA_033751.1
N
0.750
BRADI3G05380
Brachypodium distachyon
BRADI3G05380
N
0.736
Ciclev10021750m.g
Citrus clementina
Ciclev10021750m.g
N
0.736
Ciclev10016385m.g
Citrus clementina
Ciclev10016385m.g
N
0.736
GLYMA15G17040
Glycine max
GLYMA15G17040
N
0.736
Aquca_013_00703
Aquilegia coerulea
Aquca_013_00703
N
0.736
Pavir.Db00476
Panicum virgatum
Pavir.Db00476
N
0.736
Traes_7AL_5E9E6A334
Triticum aestivum
Traes_7AL_5E9E6A334
N
0.736
Thhalv10006374m.g
Eutrema salsugineum
Thhalv10006374m.g
N
0.736
Pm017841
Prunus mume
Pm017841
N
0.736
Eucgr.E01501
Eucalyptus grandis
Eucgr.E01501
N
0.736
BGIOSGA023427
Oryza indica
BGIOSGA023427
N
0.736
BRADI1G32050
Brachypodium distachyon
BRADI1G32050
N
0.736
Traes_6BS_4DA724E79
Triticum aestivum
Traes_6BS_4DA724E79
N
0.736
OS06G0666100
Oryza sativa
OS06G0666100
N
0.736
PRUPE_ppa023785mg
Prunus persica
PRUPE_ppa023785mg
N
0.736
OLONG_011712
Oryza longistaminata
OLONG_011712
N
0.736
ORGLA06G0201700
Oryza glaberrima
ORGLA06G0201700
N
0.736
ONIVA03G43780
Oryza nivara
ONIVA03G43780
N
0.736
OPUNC06G21750
Oryza punctata
OPUNC06G21750
N
0.736
Sb10g026620
Sorghum bicolor
Sb10g026620
N
0.736
OBART06G24000
Oryza barthii
OBART06G24000
N
0.736
MLOC_21744
Hordeum vulgare
MLOC_21744
N
0.736
orange1.1g048158m.g
Citrus sinensis
orange1.1g048158m.g
N
0.736
OMERI06G23930
Oryza meridionalis
OMERI06G23930
N
0.736
LPERR02G04770
Leersia perrieri
LPERR02G04770
N
0.736
GSMUA_Achr9G30790_001
Musa acuminata
GSMUA_Achr9G30790_001
N
0.736
LPERR06G19930
Leersia perrieri
LPERR06G19930
N
0.736
OGLUM06G25260
Oryza glumaepatula
OGLUM06G25260
N
0.732
Cagra.6011s0013
Capsella grandiflora
Cagra.6011s0013
N
0.722
Carubv10019494m.g
Capsella rubella
Carubv10019494m.g
N
0.722
Gorai.001G174900
Gossypium raimondii
Gorai.001G174900
N
0.722
Eucgr.E04309
Eucalyptus grandis
Eucgr.E04309
N
0.722
Pavir.Da00255
Panicum virgatum
Pavir.Da00255
N
0.722
Bostr.13158s0066
Boechera stricta
Bostr.13158s0066
N
0.722
TCM_006017
Theobroma cacao
TCM_006017
N
0.722
GLYMA11G03370
Glycine max
GLYMA11G03370
N
0.722
cassava11490.m1
Manihot esculenta
cassava11490.m1
N
0.722
Traes_7DL_B446D4CC6
Triticum aestivum
Traes_7DL_B446D4CC6
N
0.722
Bra014478
Brassica rapa
Bra014478
N
0.722
Traes_6DS_CA4C01DEF
Triticum aestivum
Traes_6DS_CA4C01DEF
N
0.722
Bo4g104880
Brassica oleracea
Bo4g104880
N
0.722
fgenesh2_kg.5__2532__AT3G60670.1
Arabidopsis lyrata
fgenesh2_kg.5__2532__AT3G60670.1
N
0.722
GSMUA_Achr2G02580_001
Musa acuminata
GSMUA_Achr2G02580_001
N
0.722
OLONG_022199
Oryza longistaminata
OLONG_022199
N
0.722
AT3G60670
Arabidopsis thaliana
AT3G60670
N
0.722
PK22765.1
Cannabis sativa
PK22765.1
N
0.719
fgenesh1_pm.C_scaffold_1002523
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002523
N
0.718
Bostr.15697s0409
Boechera stricta
Bostr.15697s0409
N
0.718
Bo7g041160
Brassica oleracea
Bo7g041160
N
0.718
AT1G31040
Arabidopsis thaliana
AT1G31040
N
0.718
Carubv10011663m.g
Capsella rubella
Carubv10011663m.g
N
0.718
Bra014899
Brassica rapa
Bra014899
N
0.718
Cagra.1508s0089
Capsella grandiflora
Cagra.1508s0089
N
0.718
Si007394m.g
Setaria italica
Si007394m.g
N
0.712
PK04104.1
Cannabis sativa
PK04104.1
N
0.708
SELMODRAFT_412053
Selaginella moellendorffii
SELMODRAFT_412053
N
0.708
SELMODRAFT_429924
Selaginella moellendorffii
SELMODRAFT_429924
N
0.708
Cucsa.048750
Cucumis sativus
Cucsa.048750
N
0.708
Cucsa.132770
Cucumis sativus
Cucsa.132770
N
0.708
Cla010042
Citrullus lanatus
Cla010042
N
0.708
estExt_fgenesh1_pg.C_4410003
Physcomitrella patens
estExt_fgenesh1_pg.C_4410003
N
0.708
Gorai.004G110400
Gossypium raimondii
Gorai.004G110400
N
0.708
e_gw1.3.608.1
Physcomitrella patens
e_gw1.3.608.1
N
0.708
estExt_Genewise1.C_5600001
Physcomitrella patens
estExt_Genewise1.C_5600001
N
0.708
Solyc02g068510.1
Solanum lycopersicum
Solyc02g068510.1
N
0.708
PK10752.1
Cannabis sativa
PK10752.1
N
0.706
Thhalv10009789m.g
Eutrema salsugineum
Thhalv10009789m.g
N
0.704
Bra038403
Brassica rapa
Bra038403
N
0.704
evm.TU.supercontig_30.133
Carica papaya
evm.TU.supercontig_30.133
N
0.704
Bo2g121040
Brassica oleracea
Bo2g121040
N
0.704