CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.G02080
(
Eucalyptus grandis
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Eucgr.G02080
T316025_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G01818
M07247_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT2G01818_col_a
0.718
0.718
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.G02080.1
PLATZ
168
245
CKYVYQDVVRLQEVQKHLDCSKIQTYKINGEKAVHLNPRPQSKDTKPSTKSKNGGTCEACGRYIQDLPNRFCSIACKV
Links
Other
PLATZ
family TFs
Other
Eucalyptus grandis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy