CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RELB
(
Tupaia belangeri
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSTBEG00000001763
T317522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RELB
M08161_2.00
Homo sapiens
NNATTCCCCNN
NNGGGGAATNN
ChIP-seq
Mathelier et al.(2014)
MA1117.1
1.000
1.000
RELB
M09347_2.00
Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB
Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C
1.000
1.000
Relb
M09352_2.00
Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB
Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C
1.000
1.000
RELB
M11227_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELBP50_Q3
1.000
1.000
RELA
M02711_2.00
Homo sapiens
SGGRVTTTCC
GGAAABYCCS
SELEX
Mathelier et al.(2014)
MA0107.1
0.714
0.714
RELA
M07999_2.00
Homo sapiens
DGGGRMTTTCCMVN
NBKGGAAAKYCCCH
ChIP-seq
Gerstein et al.(2012)
GM10847_NFKB_Stanford
0.714
0.714
RELA
M08000_2.00
Homo sapiens
NDGGGRMWTTCCHN
NDGGAAWKYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM12878_NFKB_Stanford
0.714
0.714
RELA
M08001_2.00
Homo sapiens
NDGGGRMTTTCCMVN
NBKGGAAAKYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM12891_NFKB_Stanford
0.714
0.714
RELA
M08002_2.00
Homo sapiens
DGGGRHTTTCCMVNN
NNBKGGAAADYCCCH
ChIP-seq
Gerstein et al.(2012)
GM12892_NFKB_Stanford
0.714
0.714
RELA
M08003_2.00
Homo sapiens
DGGGRVTTTCCHVN
NBDGGAAABYCCCH
ChIP-seq
Gerstein et al.(2012)
GM15510_NFKB_Stanford
0.714
0.714
RELA
M08004_2.00
Homo sapiens
NDGGGRMTTTCCMNN
NNKGGAAAKYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM18505_NFKB_Stanford
0.714
0.714
RELA
M08005_2.00
Homo sapiens
NDGGGRHTTTCCMVN
NBKGGAAADYCCCHN
ChIP-seq
Gerstein et al.(2012)
GM18526_NFKB_Stanford
0.714
0.714
RELA
M08006_2.00
Homo sapiens
GGGRVTTTCCM
KGGAAABYCCC
ChIP-seq
Gerstein et al.(2012)
GM18951_NFKB_Stanford
0.714
0.714
RELA
M08007_2.00
Homo sapiens
DGGGRMTTTCCMV
BKGGAAAKYCCCH
ChIP-seq
Gerstein et al.(2012)
GM19099_NFKB_Stanford
0.714
0.714
RELA
M08008_2.00
Homo sapiens
DGGGRMTTTCCMNNN
NNNKGGAAAKYCCCH
ChIP-seq
Gerstein et al.(2012)
GM19193_NFKB_Stanford
0.714
0.714
Rela
M08039_2.00
Mus musculus
DGGRVTTTCCM
KGGAAABYCCH
ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input_LPSstim
0.714
0.714
Rela
M08038_2.00
Mus musculus
HHYYYCYYNYHYYYNHYYYYCYWNNSYTBY
RVARSNNWRGRRRRDNRRRDRNRRGRRRDD
ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input
0.714
0.714
RELA
M09351_2.00
Homo sapiens
NWGGGRHWTTCCMV
BKGGAAWDYCCCWN
Misc
Kulakovskiy et al.(2013)
TF65_HUMAN.H11MO.0.A
0.714
0.714
Rela
M09355_2.00
Mus musculus
KGGRVTTYCCM
KGGRAABYCCM
Misc
Kulakovskiy et al.(2013)
TF65_MOUSE.H11MO.0.A
0.714
0.714
RELA
M09626_2.00
Homo sapiens
DGGGRVWTTCCM
KGGAAWBYCCCH
Misc
Heinz et al.(2010)
GM12787-p65_GSE19485
0.714
0.714
RELA
M11237_2.00
Homo sapiens
BGGRVTTTCC
GGAAABYCCV
Transfac
Matys et al.(2006)
V$NFKAPPAB65_01
0.714
0.714
RELA
M11238_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_02
0.714
0.714
RELA
M11239_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_03
0.714
0.714
RELA
M11240_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_04
0.714
0.714
RELA
M11241_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_05
0.714
0.714
RELA
M11242_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELA_Q6
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000001548
Rel
122
169
LVITEQPKQRGMRFRYECEGRSAGSILGESSTEASKTLPAIEXXXXXX
Links
Other
Rel
family TFs
Other
Tupaia belangeri
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy