RFX5 (Dasypus novemcinctus)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 ENSDNOG00000035113 T318203_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX5
M03458_2.00 		Homo sapiens
BGTTRCYATRGYAACV
BGTTRCYATRGYAACV		 SELEX
Jolma et al.(2013)
RFX5_1 		0.687 0.754
RFX5
M03459_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_2 		0.687 0.754
RFX5
M03460_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_3 		0.687 0.754
RFX5
M05725_2.00 		Homo sapiens
BGTTRCYANGBGTTGCYRN
NYRGCAACVCNTRGYAACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_1 		0.687 0.754
RFX5
M05726_2.00 		Homo sapiens
NYRVYAACSGTTRCYAN
NTRGYAACSGTTRBYRN		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_2 		0.687 0.754
RFX5
M08009_2.00 		Homo sapiens
KCRBYDGTTRCYRRG
CYYRGYAACHRVYGM		 ChIP-seq
Gerstein et al.(2012)
GM12878_RFX5_Stanford 		0.687 0.754
RFX5
M08010_2.00 		Homo sapiens
DBVBYDGTTGCYRGGBVRR
YYBVCCYRGCAACHRVBVH		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RFX5_Stanford 		0.687 0.754
RFX5
M08011_2.00 		Homo sapiens
TCVBYDGTTDCYRDG
CHYRGHAACHRVBGA		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_RFX5_Stanford 		0.687 0.754
RFX5
M08012_2.00 		Homo sapiens
YDGTTRCYRKGBVRV
BYBVCMYRGYAACHR		 ChIP-seq
Gerstein et al.(2012)
HepG2_RFX5_Stanford 		0.687 0.754
RFX5
M09364_2.00 		Homo sapiens
VNNVBYDGTTGCYRKGNVRV
BYBNCMYRGCAACHRVBNNB		 Misc
Kulakovskiy et al.(2013)
RFX5_HUMAN.H11MO.0.A 		0.687 0.754
RFX5
M09629_2.00 		Homo sapiens
NDGTTRCYADGV
BCHTRGYAACHN		 Misc
Heinz et al.(2010)
GM12878-Rfx5_GSE31477 		0.687 0.754
RFX5
M11249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_03 		0.687 0.754
RFX5
M11250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_05 		0.687 0.754
RFX5
M05727_2.00 		Homo sapiens
BGTYRYYRNGBGTTGYYRN
NYRRCAACVCNYRRYRACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_1 		0.687 0.754
RFX5
M05728_2.00 		Homo sapiens
NTRGYAASSGTYRBYRN
NYRVYRACSSTTRCYAN		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_2 		0.687 0.754
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000025080 RFX 105 174

Links

Other RFX family TFs
Other Dasypus novemcinctus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RFX5 Choloepus hoffmanni ENSCHOG00000012900 I 0.688
ENSOCUG00000011564 Oryctolagus cuniculus ENSOCUG00000011564 I 0.687
ENSPANG00000005712 Papio anubis ENSPANG00000005712 I 0.687
ENSPPYG00000000867 Pongo abelii ENSPPYG00000000867 I 0.687
RFX5 Pan troglodytes ENSPTRG00000001286 I 0.687
ENSOARG00000020987 Ovis aries ENSOARG00000020987 I 0.687
RFX5 Pteropus vampyrus ENSPVAG00000011680 I 0.687
ENSMPUG00000003735 Mustela putorius furo ENSMPUG00000003735 I 0.687
Rfx5 Mus musculus ENSMUSG00000005774 I 0.687
ENSNLEG00000010170 Nomascus leucogenys ENSNLEG00000010170 I 0.687
ENSMMUG00000013172 Macaca mulatta ENSMMUG00000013172 I 0.687
Rfx5 Rattus norvegicus ENSRNOG00000021012 I 0.687
ENSP00000389130-D1 Bos grunniens ENSP00000389130-D1 I 0.687
ENSP00000389130 Macaca fascicularis ENSP00000389130 I 0.687
Myotis_brandtii_RFX5_10008035 Myotis brandtii Myotis_brandtii_RFX5_10008035 I 0.687
RFX5 Tursiops truncatus ENSTTRG00000007023 I 0.687
RFX5 Tupaia belangeri ENSTBEG00000006419 I 0.687
RFX5 Sorex araneus ENSSARG00000000750 I 0.687
ENSSHAG00000014366 Sarcophilus harrisii ENSSHAG00000014366 I 0.687
RFX5 Sus scrofa ENSSSCG00000006625 I 0.687
RFX5 Myotis lucifugus ENSMLUG00000015218 I 0.687
RFX5 Otolemur garnettii ENSOGAG00000008120 I 0.687
ENSCSAG00000001799 Chlorocebus sabaeus ENSCSAG00000001799 I 0.687
ENSDORG00000015967 Dipodomys ordii ENSDORG00000015967 I 0.687
RFX5 Equus caballus ENSECAG00000024774 I 0.687
ENSCPOG00000010643 Cavia porcellus ENSCPOG00000010643 I 0.687
RFX5 Callithrix jacchus ENSCJAG00000007482 I 0.687
RFX5 Bos taurus ENSBTAG00000017580 I 0.687
ENSAMEG00000000695 Ailuropoda melanoleuca ENSAMEG00000000695 I 0.687
RFX5 Canis familiaris ENSCAFG00000012661 I 0.687
RFX5 Echinops telfairi ENSETEG00000013503 I 0.687
RFX5 Erinaceus europaeus ENSEEUG00000010785 I 0.687
RFX5 Gorilla gorilla ENSGGOG00000016795 I 0.687
RFX5 Homo sapiens ENSG00000143390 D 0.687
RFX5 Felis catus ENSFCAG00000005568 I 0.687
RFX5 Loxodonta africana ENSLAFG00000030906 I 0.687
ENSMEUG00000011101 Macropus eugenii ENSMEUG00000011101 I 0.687
ENSSTOG00000013246 Ictidomys tridecemlineatus ENSSTOG00000013246 I 0.685
RFX5 Procavia capensis ENSPCAG00000011056 I 0.684
RFX5 Gallus gallus ENSGALG00000000836 I 0.679
ENSACAG00000029645 Anolis carolinensis ENSACAG00000029645 I 0.677
ENSFALG00000010929 Ficedula albicollis ENSFALG00000010929 I 0.677
Gfo_R003263 Geospiza fortis Gfo_R003263 I 0.677
ENSMGAG00000001126 Meleagris gallopavo ENSMGAG00000001126 I 0.674
Alligator_sinensis_CCG020683.1 Alligator sinensis Alligator_sinensis_CCG020683.1 I 0.673
rfx5 Xenopus tropicalis XB-GENE-5942579 I 0.673
Pvit_04986 Pogona vitticeps Pvit_04986 I 0.673
ENSTRUG00000000177 Takifugu rubripes ENSTRUG00000000177 I 0.671
rfx5 Tetraodon nigroviridis ENSTNIG00000005388 I 0.671
ENSONIG00000003955 Oreochromis niloticus ENSONIG00000003955 I 0.670
ENSPFOG00000010592 Poecilia formosa ENSPFOG00000010592 I 0.670
Afo_R007667 Aptenodytes forsteri Afo_R007667 I 0.670
ENSXMAG00000017295 Xiphophorus maculatus ENSXMAG00000017295 I 0.670
ENSAMXG00000008359 Astyanax mexicanus ENSAMXG00000008359 I 0.668
ENSLOCG00000008459 Lepisosteus oculatus ENSLOCG00000008459 I 0.668
rfx5 Danio rerio ENSDARG00000063258 I 0.667
ENSPSIG00000018073 Pelodiscus sinensis ENSPSIG00000018073 I 0.664
ENSORLG00000001269 Oryzias latipes ENSORLG00000001269 I 0.663
Ogr13052 Ophisaurus gracilis Ogr13052 I 0.663
rfx5.S Xenopus laevis XB-GENE-6079297 I 0.659
Aan_R010941 Calypte anna Aan_R010941 I 0.658