run (Drosophila pseudoobscura)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0013862 T319523_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		1.000 1.000
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.723 0.723
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.723 0.723
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.723 0.723
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0273921 Runt 117 246

Links

Other Runt family TFs
Other Drosophila pseudoobscura TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GM23050 Drosophila sechellia FBgn0177918 I 1.000
GK19815 Drosophila willistoni FBgn0221813 I 1.000
GH17740 Drosophila grimshawi FBgn0125210 I 1.000
GI15491 Drosophila mojavensis FBgn0138240 I 1.000
GL15806 Drosophila persimilis FBgn0153410 I 1.000
run Drosophila erecta FBgn0085118 I 1.000
GF15970 Drosophila ananassae FBgn0092993 I 1.000
run Drosophila virilis FBgn0013920 I 1.000
run Drosophila simulans FBgn0016352 I 1.000
run Drosophila yakuba FBgn0084618 I 1.000
run Drosophila melanogaster FBgn0003300 D 1.000
LCUP002659 Lucilia cuprina LCUP002659 I 0.962
MDOA009046 Musca domestica MDOA009046 I 0.954
MESCA003521 Megaselia scalaris MESCA003521 I 0.846
ASIS001308 Anopheles sinensis ASIS001308 I 0.846
AALB007754 Anopheles albimanus AALB007754 I 0.846
AATE017340 Anopheles atroparvus AATE017340 I 0.846
ADIR005600 Anopheles dirus ADIR005600 I 0.838
ACUA016618 Anopheles culicifacies ACUA016618 I 0.838
AMIN005759 Anopheles minimus AMIN005759 I 0.838
AFUN010423 Anopheles funestus AFUN010423 I 0.838
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.838
AFAF000166 Anopheles farauti AFAF000166 I 0.838
AEPI010884 Anopheles epiroticus AEPI010884 I 0.838
AMAM016300 Anopheles maculatus AMAM016300 I 0.838
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.833
AARA011472 Anopheles arabiensis AARA011472 I 0.831
AMEC007551 Anopheles melas AMEC007551 I 0.831
AAEL006167 Aedes aegypti AAEL006167 I 0.831
AMEM004753 Anopheles merus AMEM004753 I 0.831
PHUM333310 Pediculus humanus PHUM333310 I 0.831
AGAP001094 Anopheles gambiae AGAP001094 I 0.831
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.831
ACOM031089 Anopheles coluzzii ACOM031089 I 0.831
ACHR006341 Anopheles christyi ACHR006341 I 0.831
CPIJ001309 Culex quinquefasciatus CPIJ001309 I 0.823
CpipJ_CPIJ001309 Culex pipiens CpipJ_CPIJ001309 I 0.823
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.815
CLEC011122 Cimex lectularius CLEC011122 I 0.800
L798_10922 Zootermopsis nevadensis L798_10922 I 0.800
TC006542 Tribolium castaneum TC006542 I 0.800
LDEC006645 Leptinotarsa decemlineata LDEC006645 I 0.792
GB52719 Apis mellifera GB52719 I 0.792
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.789
SINV13356 Solenopsis invicta SINV13356 I 0.785
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.785
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I 0.772
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.769
KGM_21067 Danaus plexippus KGM_21067 I 0.769
NV17759 Nasonia vitripennis NV17759 I 0.769
LCUP002647 Lucilia cuprina LCUP002647 I 0.767
MCINX005905 Melitaea cinxia MCINX005905 I 0.762
ACEP16410 Atta cephalotes ACEP16410 I 0.762
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.760
MESCA007079 Megaselia scalaris MESCA007079 I 0.756
AALB007752 Anopheles albimanus AALB007752 I 0.750
AAEL007040 Aedes aegypti AAEL007040 I 0.746
HMEL009842 Heliconius melpomene HMEL009842 I 0.744
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.742
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.742
RPRC005391 Rhodnius prolixus RPRC005391 I 0.738
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.738
AGAP002506 Anopheles gambiae AGAP002506 I 0.738
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.738
GK25373 Drosophila willistoni FBgn0227332 I 0.738
ACEP16400 Atta cephalotes ACEP16400 I 0.738
AARA004356 Anopheles arabiensis AARA004356 I 0.738
AATE002063 Anopheles atroparvus AATE002063 I 0.738
AAEL006160 Aedes aegypti AAEL006160 I 0.738
LCUP002656 Lucilia cuprina LCUP002656 I 0.738
ACHR004078 Anopheles christyi ACHR004078 I 0.738
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.738
AMEM017856 Anopheles merus AMEM017856 I 0.738
GI14398 Drosophila mojavensis FBgn0137150 I 0.738
GJ18742 Drosophila virilis FBgn0205894 I 0.738
AMIN002518 Anopheles minimus AMIN002518 I 0.738
AEPI003479 Anopheles epiroticus AEPI003479 I 0.738
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.733
HMEL014739 Heliconius melpomene HMEL014739 I 0.733
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.733
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.733
KGM_21065 Danaus plexippus KGM_21065 I 0.733
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.733
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I 0.733
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I 0.733
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.733
Aan_R007315 Calypte anna Aan_R007315 I 0.733
GD16951 Drosophila simulans FBgn0188530 I 0.732
PHUM333320 Pediculus humanus PHUM333320 I 0.731
GG19691 Drosophila erecta FBgn0111893 I 0.731
AALB009220 Anopheles albimanus AALB009220 I 0.731
GM23044 Drosophila sechellia FBgn0177912 I 0.731
GL15800 Drosophila persimilis FBgn0153404 I 0.731
GH17737 Drosophila grimshawi FBgn0125207 I 0.731
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.731
GD17495 Drosophila simulans FBgn0189047 I 0.731
MDOA013149 Musca domestica MDOA013149 I 0.731
RunxB Drosophila melanogaster FBgn0259162 I 0.731
GE17890 Drosophila yakuba FBgn0235328 I 0.731
GK19810 Drosophila willistoni FBgn0221808 I 0.731
GJ19245 Drosophila virilis FBgn0206390 I 0.731
GF15967 Drosophila ananassae FBgn0092990 I 0.731
MESCA007078 Megaselia scalaris MESCA007078 I 0.730
AFUN005474 Anopheles funestus AFUN005474 I 0.728
Afo_R008955 Aptenodytes forsteri Afo_R008955 I 0.726
TC005566 Tribolium castaneum TC005566 I 0.723
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.723
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.723
GL16499 Drosophila persimilis FBgn0154103 I 0.723
GE17788 Drosophila yakuba FBgn0235232 I 0.723
GM22478 Drosophila sechellia FBgn0177348 I 0.723
PHUM333340 Pediculus humanus PHUM333340 I 0.723
lz Drosophila melanogaster FBgn0002576 D 0.723
GG18309 Drosophila erecta FBgn0110525 I 0.723
PHUM333300 Pediculus humanus PHUM333300 I 0.723
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I 0.722
Aan_R005895 Calypte anna Aan_R005895 I 0.722
AQUA009446 Anopheles quadriannulatus AQUA009446 I 0.720
AMAM011616 Anopheles maculatus AMAM011616 I 0.720
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.715
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.715
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.715
TC005796 Tribolium castaneum TC005796 I 0.715
SINV13363 Solenopsis invicta SINV13363 I 0.715
KGM_21075 Danaus plexippus KGM_21075 I 0.715
TC006536 Tribolium castaneum TC006536 I 0.715
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.715
NV10998 Nasonia vitripennis NV10998 I 0.715
MCINX000302 Melitaea cinxia MCINX000302 I 0.715
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I 0.714
LCUP002652 Lucilia cuprina LCUP002652 I 0.713
RUNX2 Tupaia belangeri ENSTBEG00000000948 I 0.711
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I 0.711
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I 0.711
RUNX2 Loxodonta africana ENSLAFG00000005054 I 0.711
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I 0.711
RUNX2 Felis catus ENSFCAG00000022480 I 0.711
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I 0.711
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I 0.711
RUNX2 Myotis lucifugus ENSMLUG00000000514 I 0.711
Runx1 Mus musculus ENSMUSG00000022952 D 0.710
CGI_10005366 Crassostrea gigas CGI_10005366 I 0.708
GL15927 Drosophila persimilis FBgn0153531 I 0.708
GA25684 Drosophila pseudoobscura FBgn0247061 I 0.708
GE15340 Drosophila yakuba FBgn0232921 I 0.708
GB52721 Apis mellifera GB52721 I 0.708
GB52761 Apis mellifera GB52761 I 0.708
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.708
LotgiG96224 Lottia gigantea LotgiG96224 I 0.708
RunxA Drosophila melanogaster FBgn0083981 I 0.708
GK20052 Drosophila willistoni FBgn0222049 I 0.708
GH17774 Drosophila grimshawi FBgn0125244 I 0.708
GG17578 Drosophila erecta FBgn0109803 I 0.708
GF15983 Drosophila ananassae FBgn0093006 I 0.708
GI15119 Drosophila mojavensis FBgn0137869 I 0.708
GJ18917 Drosophila virilis FBgn0206063 I 0.708
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.708
GM22662 Drosophila sechellia FBgn0177532 I 0.708
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.707
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.705
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.705
ISCW004493 Ixodes scapularis ISCW004493 I 0.703
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.703
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.703
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.703
Tal_R011874 Tyto alba Tal_R011874 I 0.703
AALB007753 Anopheles albimanus AALB007753 I 0.702
ASIS002518 Anopheles sinensis ASIS002518 I 0.702
MDOA010744 Musca domestica MDOA010744 I 0.700
MDOA011942 Musca domestica MDOA011942 I 0.700
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.700
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I 0.700
GB52718 Apis mellifera GB52718 I 0.700
SINV13317 Solenopsis invicta SINV13317 I 0.700
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.700
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.700
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.700
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.700
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.700
NV11000 Nasonia vitripennis NV11000 I 0.700