CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_22526
(
Cicer arietinum
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Ca_22526
T323178_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN
NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.940
0.760
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.919
0.760
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.908
0.680
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.908
0.680
SPL14
M11270_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.908
0.680
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN
NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.906
0.693
POPTR_0002s00440
M02477_2.00
Populus trichocarpa
NGTACGG
CCGTACN
PBM
Weirauch et al.(2014)
pTH9280
0.905
0.667
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN
NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.900
0.720
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.900
0.720
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.900
0.720
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.896
0.667
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN
NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.889
0.707
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD
HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.887
0.680
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_22526
SBP
55
129
CQAESCDADFTLSKRYHRRHKVCEVHSKAPSVVVAGLRQRFCQQCSRFHELMEFDEAKRSCRRRLARHNERRRKS
Links
Other
SBP
family TFs
Other
Cicer arietinum
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g078770
Medicago truncatula
MTR_2g078770
I
0.973
GLYMA13G35000
Glycine max
GLYMA13G35000
I
0.965
GLYMA12G35460
Glycine max
GLYMA12G35460
I
0.965
Eucgr.F03303
Eucalyptus grandis
Eucgr.F03303
I
0.947
28211.m000132
Ricinus communis
28211.m000132
I
0.942
VIT_19s0014g02350
Vitis vinifera
VIT_19s0014g02350
I
0.942
cassava37839.valid.m1
Manihot esculenta
cassava37839.valid.m1
I
0.940
PK22320.1
Cannabis sativa
PK22320.1
D
0.940
TCM_031595
Theobroma cacao
TCM_031595
I
0.937
POPTR_0001s40870
Populus trichocarpa
POPTR_0001s40870
I
0.937
Gorai.013G169800
Gossypium raimondii
Gorai.013G169800
I
0.937
SapurV1A.0156s0200
Salix purpurea
SapurV1A.0156s0200
I
0.936
POPTR_0011s11770
Populus trichocarpa
POPTR_0011s11770
I
0.936
orange1.1g029650m.g
Citrus sinensis
orange1.1g029650m.g
I
0.935
evm.TU.supercontig_80.88
Carica papaya
evm.TU.supercontig_80.88
I
0.935
Ciclev10016841m.g
Citrus clementina
Ciclev10016841m.g
I
0.934
SapurV1A.1264s0060
Salix purpurea
SapurV1A.1264s0060
I
0.931
chr3.CM0282.980.nc
Lotus japonicus
chr3.CM0282.980.nc
I
0.930
GLYMA06G36140
Glycine max
GLYMA06G36140
I
0.930
Ca_16243
Cicer arietinum
Ca_16243
I
0.929
GLYMA12G27330
Glycine max
GLYMA12G27330
I
0.929
MTR_8g463140
Medicago truncatula
MTR_8g463140
I
0.929
MDP0000158607
Malus domestica
MDP0000158607
I
0.927
Cla002263
Citrullus lanatus
Cla002263
I
0.927
Bostr.28625s0189
Boechera stricta
Bostr.28625s0189
I
0.927
gene29726-v1.0-hybrid
Fragaria vesca
gene29726-v1.0-hybrid
I
0.926
Thhalv10021617m.g
Eutrema salsugineum
Thhalv10021617m.g
I
0.923
Pm011381
Prunus mume
Pm011381
I
0.921
PRUPE_ppa022739mg
Prunus persica
PRUPE_ppa022739mg
I
0.921
Bra027265
Brassica rapa
Bra027265
I
0.920
PGSC0003DMG400032817
Solanum tuberosum
PGSC0003DMG400032817
I
0.920
Cucsa.196000
Cucumis sativus
Cucsa.196000
I
0.920
Bo5g127310
Brassica oleracea
Bo5g127310
I
0.920
Bra038101
Brassica rapa
Bra038101
I
0.920
cassava31252.valid.m1
Manihot esculenta
cassava31252.valid.m1
I
0.919
SPL4
Arabidopsis thaliana
AT1G53160
D
0.919
Thhalv10011728m.g
Eutrema salsugineum
Thhalv10011728m.g
I
0.919
AMTR_s00062p00211520
Amborella trichopoda
AMTR_s00062p00211520
I
0.917
Bostr.0124s0106
Boechera stricta
Bostr.0124s0106
I
0.916
Ciclev10009879m.g
Citrus clementina
Ciclev10009879m.g
I
0.915
chr1.CM0122.330.nc
Lotus japonicus
chr1.CM0122.330.nc
I
0.915
SPL4
Arabidopsis lyrata
fgenesh2_kg.1__4389__AT1G53160.2
I
0.915
orange1.1g032937m.g
Citrus sinensis
orange1.1g032937m.g
I
0.915
Solyc05g053240.2
Solanum lycopersicum
Solyc05g053240.2
I
0.914
PGSC0003DMG400027151
Solanum tuberosum
PGSC0003DMG400027151
I
0.914
Cla023735
Citrullus lanatus
Cla023735
I
0.914
Aquca_033_00055
Aquilegia coerulea
Aquca_033_00055
I
0.912
MTR_2g046550
Medicago truncatula
MTR_2g046550
I
0.912
VIT_12s0028g03350
Vitis vinifera
VIT_12s0028g03350
I
0.912
Bo2g091010
Brassica oleracea
Bo2g091010
I
0.912
29983.m003158
Ricinus communis
29983.m003158
I
0.912
GSMUA_Achr2G01820_001
Musa acuminata
GSMUA_Achr2G01820_001
I
0.912
POPTR_0010s16370
Populus trichocarpa
POPTR_0010s16370
I
0.912
Bra015732
Brassica rapa
Bra015732
I
0.911
Gorai.005G071400
Gossypium raimondii
Gorai.005G071400
I
0.911
Ca_18591
Cicer arietinum
Ca_18591
I
0.911
Bo6g120690
Brassica oleracea
Bo6g120690
I
0.911
GLYMA07G36180
Glycine max
GLYMA07G36180
I
0.911
Bra025863
Brassica rapa
Bra025863
I
0.909
Bo6g029290
Brassica oleracea
Bo6g029290
I
0.908
Carubv10008169m.g
Capsella rubella
Carubv10008169m.g
I
0.908
Eucgr.E03260
Eucalyptus grandis
Eucgr.E03260
I
0.908
SapurV1A.0016s0070
Salix purpurea
SapurV1A.0016s0070
I
0.908
Bostr.7128s0689
Boechera stricta
Bostr.7128s0689
I
0.908
SapurV1A.0554s0130
Salix purpurea
SapurV1A.0554s0130
I
0.908
Carubv10012577m.g
Capsella rubella
Carubv10012577m.g
I
0.908
POPTR_0005s28010
Populus trichocarpa
POPTR_0005s28010
I
0.908
SPL14
Arabidopsis thaliana
AT1G20980
D
0.908
SPL14
Arabidopsis lyrata
fgenesh2_kg.1__2292__AT1G20980.1
I
0.908
Bostr.20129s0096
Boechera stricta
Bostr.20129s0096
I
0.908
TCM_034803
Theobroma cacao
TCM_034803
I
0.908
TRIUR3_23102
Triticum urartu
TRIUR3_23102
I
0.907
MLOC_13032
Hordeum vulgare
MLOC_13032
I
0.907
Traes_2BS_186EA570A
Triticum aestivum
Traes_2BS_186EA570A
I
0.907
MTR_7g110320
Medicago truncatula
MTR_7g110320
I
0.906
Carubv10014636m.g
Capsella rubella
Carubv10014636m.g
I
0.906
Ca_01036
Cicer arietinum
Ca_01036
I
0.906
Cagra.0007s0069
Capsella grandiflora
Cagra.0007s0069
I
0.906
SPL12
Arabidopsis thaliana
AT3G60030
D
0.906
POPTR_0002s00440
Populus trichocarpa
POPTR_0002s00440
D
0.905
Bo5g030930
Brassica oleracea
Bo5g030930
I
0.905
Solyc07g053810.2
Solanum lycopersicum
Solyc07g053810.2
I
0.904
GSMUA_Achr5G27280_001
Musa acuminata
GSMUA_Achr5G27280_001
I
0.904
GLYMA17G04400
Glycine max
GLYMA17G04400
I
0.903
MDP0000156994
Malus domestica
MDP0000156994
I
0.903
Lus10013999.g
Linum usitatissimum
Lus10013999.g
I
0.903
MDP0000861601
Malus domestica
MDP0000861601
I
0.903
Lus10015421.g
Linum usitatissimum
Lus10015421.g
I
0.903
Eucgr.K01046
Eucalyptus grandis
Eucgr.K01046
I
0.902
OB04G27960
Oryza brachyantha
OB04G27960
I
0.902
estExt_fgenesh1_pg.C_1940032
Physcomitrella patens
estExt_fgenesh1_pg.C_1940032
I
0.901
Thhalv10001295m.g
Eutrema salsugineum
Thhalv10001295m.g
I
0.901
Cagra.16630s0008
Capsella grandiflora
Cagra.16630s0008
I
0.901
OBART04G20940
Oryza barthii
OBART04G20940
I
0.900
ONIVA04G19190
Oryza nivara
ONIVA04G19190
I
0.900
OPUNC04G18620
Oryza punctata
OPUNC04G18620
I
0.900
OMERI04G17360
Oryza meridionalis
OMERI04G17360
I
0.900
SPL7
Oryza sativa
OS04G0551500
I
0.900
OGLUM04G20870
Oryza glumaepatula
OGLUM04G20870
I
0.900
TCM_008150
Theobroma cacao
TCM_008150
I
0.900
BGIOSGA016888
Oryza indica
BGIOSGA016888
I
0.900
ORUFI04G22540
Oryza rufipogon
ORUFI04G22540
I
0.900
SPL5
Arabidopsis thaliana
AT3G15270
D
0.900
Cagra.1472s0017
Capsella grandiflora
Cagra.1472s0017
I
0.900
Carubv10010422m.g
Capsella rubella
Carubv10010422m.g
I
0.900
ORGLA04G0180000
Oryza glaberrima
ORGLA04G0180000
I
0.900
Gorai.002G112200
Gossypium raimondii
Gorai.002G112200
I
0.899
SPL1
Arabidopsis lyrata
fgenesh2_kg.4__2943__AT2G47070.1
I
0.898
PRUPE_ppa011968mg
Prunus persica
PRUPE_ppa011968mg
I
0.897
Pm014154
Prunus mume
Pm014154
I
0.897
GSMUA_Achr3G24520_001
Musa acuminata
GSMUA_Achr3G24520_001
I
0.897
AMTR_s00019p00235390
Amborella trichopoda
AMTR_s00019p00235390
I
0.897
MDP0000919693
Malus domestica
MDP0000919693
I
0.896
Pm010075
Prunus mume
Pm010075
I
0.896
TRIUR3_10193
Triticum urartu
TRIUR3_10193
I
0.896
scaffold_202615.1
Arabidopsis lyrata
scaffold_202615.1
I
0.896
Si034095m.g
Setaria italica
Si034095m.g
I
0.896
Sb01g002530
Sorghum bicolor
Sb01g002530
I
0.896
PRUPE_ppa012607mg
Prunus persica
PRUPE_ppa012607mg
I
0.896
AT1G76580
Arabidopsis thaliana
AT1G76580
D
0.896
GSMUA_Achr1G08440_001
Musa acuminata
GSMUA_Achr1G08440_001
I
0.896
Pavir.J01500
Panicum virgatum
Pavir.J01500
I
0.896
GRMZM2G156756
Zea mays
GRMZM2G156756
I
0.896
BRADI1G26720
Brachypodium distachyon
BRADI1G26720
I
0.896
Pavir.Ia00235
Panicum virgatum
Pavir.Ia00235
I
0.896
TRIUR3_31982
Triticum urartu
TRIUR3_31982
I
0.895
F775_27970
Aegilops tauschii
F775_27970
I
0.895
Traes_7DS_AB399594E
Triticum aestivum
Traes_7DS_AB399594E
I
0.895
BRADI3G40240
Brachypodium distachyon
BRADI3G40240
I
0.895
Traes_7AS_0F019FB93
Triticum aestivum
Traes_7AS_0F019FB93
I
0.895
MLOC_4792
Hordeum vulgare
MLOC_4792
I
0.895
ONIVA03G41820
Oryza nivara
ONIVA03G41820
I
0.894
SPL6
Oryza sativa
OS03G0833300
I
0.894
OPUNC03G37170
Oryza punctata
OPUNC03G37170
I
0.894
ORUFI03G41710
Oryza rufipogon
ORUFI03G41710
I
0.894
ORGLA03G0367800
Oryza glaberrima
ORGLA03G0367800
I
0.894
OPUNC03G37130
Oryza punctata
OPUNC03G37130
I
0.894
OMERI03G36740
Oryza meridionalis
OMERI03G36740
I
0.894
OB03G47050
Oryza brachyantha
OB03G47050
I
0.894
OBART03G39900
Oryza barthii
OBART03G39900
I
0.894
OGLUM03G39810
Oryza glumaepatula
OGLUM03G39810
I
0.894
Bo4g005730
Brassica oleracea
Bo4g005730
I
0.893
BRADI1G02760
Brachypodium distachyon
BRADI1G02760
I
0.893
F775_31139
Aegilops tauschii
F775_31139
I
0.893
Bra041037
Brassica rapa
Bra041037
I
0.893
MLOC_4830
Hordeum vulgare
MLOC_4830
I
0.893
Bostr.25993s0059
Boechera stricta
Bostr.25993s0059
I
0.893
Traes_5BL_3503725F1
Triticum aestivum
Traes_5BL_3503725F1
I
0.893
Traes_5DL_3CDCC5DFF
Triticum aestivum
Traes_5DL_3CDCC5DFF
I
0.893
TRIUR3_33729
Triticum urartu
TRIUR3_33729
I
0.893
Traes_4AL_5062917C4
Triticum aestivum
Traes_4AL_5062917C4
I
0.893
LPERR08G17180
Leersia perrieri
LPERR08G17180
I
0.892
LPERR03G34030
Leersia perrieri
LPERR03G34030
I
0.892
PDK_20s1709081g002
Phoenix dactylifera
PDK_20s1709081g002
I
0.892
AMTR_s00022p00106940
Amborella trichopoda
AMTR_s00022p00106940
I
0.892
AMTR_s00106p00142470
Amborella trichopoda
AMTR_s00106p00142470
I
0.891
mgf011616m
Mimulus guttatus
mgf011616m
I
0.891
TCM_004922
Theobroma cacao
TCM_004922
I
0.891
MDP0000149339
Malus domestica
MDP0000149339
I
0.891
GLYMA10G01211
Glycine max
GLYMA10G01211
I
0.891
GLYMA02G01160
Glycine max
GLYMA02G01160
I
0.891
gene00196-v1.0-hybrid
Fragaria vesca
gene00196-v1.0-hybrid
I
0.891
Bra039656
Brassica rapa
Bra039656
I
0.890
Bo6g031220
Brassica oleracea
Bo6g031220
I
0.890
PK06791.1
Cannabis sativa
PK06791.1
D
0.889
orange1.1g001971m.g
Citrus sinensis
orange1.1g001971m.g
I
0.889
SELMODRAFT_437670
Selaginella moellendorffii
SELMODRAFT_437670
I
0.889
SELMODRAFT_445524
Selaginella moellendorffii
SELMODRAFT_445524
I
0.889
Ciclev10018697m.g
Citrus clementina
Ciclev10018697m.g
I
0.889
Eucgr.A01019
Eucalyptus grandis
Eucgr.A01019
I
0.889
Ca_03548
Cicer arietinum
Ca_03548
I
0.889
VIT_07s0005g02260
Vitis vinifera
VIT_07s0005g02260
I
0.889
Lus10010071.g
Linum usitatissimum
Lus10010071.g
I
0.889
cassava36085.valid.m1
Manihot esculenta
cassava36085.valid.m1
I
0.889
Gorai.008G135700
Gossypium raimondii
Gorai.008G135700
I
0.889
MTR_1g086250
Medicago truncatula
MTR_1g086250
I
0.889
30076.m004574
Ricinus communis
30076.m004574
I
0.889
Lus10004523.g
Linum usitatissimum
Lus10004523.g
I
0.889
Bostr.29344s0010
Boechera stricta
Bostr.29344s0010
I
0.888
GSMUA_Achr2G03070_001
Musa acuminata
GSMUA_Achr2G03070_001
I
0.888
Cagra.3527s0045
Capsella grandiflora
Cagra.3527s0045
I
0.888
MLOC_6525
Hordeum vulgare
MLOC_6525
I
0.888
PRUPE_ppa000682mg
Prunus persica
PRUPE_ppa000682mg
D
0.887
OB08G27190
Oryza brachyantha
OB08G27190
I
0.887
Pm022881
Prunus mume
Pm022881
I
0.887
29889.m003388
Ricinus communis
29889.m003388
I
0.887
GSMUA_Achr7G20620_001
Musa acuminata
GSMUA_Achr7G20620_001
I
0.886
chr5.CM0158.110.nc
Lotus japonicus
chr5.CM0158.110.nc
I
0.886
MDP0000180408
Malus domestica
MDP0000180408
I
0.886
cassava29736.valid.m1
Manihot esculenta
cassava29736.valid.m1
I
0.886
PRUPE_ppa000792mg
Prunus persica
PRUPE_ppa000792mg
I
0.886
gw1.313.30.1
Physcomitrella patens
gw1.313.30.1
I
0.886