Ca_22526 (Cicer arietinum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Ca_22526 T323178_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK22320.1
M02483_2.00
Cannabis sativa
NNGTACGGNN

NNCCGTACNN
PBM
Weirauch et al.(2014)
pTH9723
0.940 0.760
SPL4
M02472_2.00
Arabidopsis thaliana
NRTACDDNN

NNHHGTAYN
PBM
Weirauch et al.(2014)
pTH7408
0.919 0.760
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.908 0.680
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.908 0.680
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.908 0.680
SPL12
M02475_2.00
Arabidopsis thaliana
NGTACGDN

NHCGTACN
PBM
Weirauch et al.(2014)
pTH7500
0.906 0.693
POPTR_0002s00440
M02477_2.00
Populus trichocarpa
NGTACGG

CCGTACN
PBM
Weirauch et al.(2014)
pTH9280
0.905 0.667
SPL5
M02474_2.00
Arabidopsis thaliana
NNGTACGDN

NHCGTACNN
PBM
Weirauch et al.(2014)
pTH7385
0.900 0.720
SPL5
M07261_2.00
Arabidopsis thaliana
NDNYGTACGGAH

DTCCGTACRNHN
Dap-seq
OMalley et al.(2016)
SPL5_col_a
0.900 0.720
SPL5
M07262_2.00
Arabidopsis thaliana
NBGTACGGWH

DWCCGTACVN
Dap-seq
OMalley et al.(2016)
SPL5_colamp_a
0.900 0.720
AT1G76580
M02473_2.00
Arabidopsis thaliana
NNNRTAYNNN

NNNRTAYNNN
PBM
Weirauch et al.(2014)
pTH8668
0.896 0.667
PK06791.1
M02482_2.00
Cannabis sativa
NNGTACGRN

NYCGTACNN
PBM
Weirauch et al.(2014)
pTH9583
0.889 0.707
PRUPE_ppa000682mg
M02478_2.00
Prunus persica
NNNNGTACGD

HCGTACNNNN
PBM
Weirauch et al.(2014)
pTH9281
0.887 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_22526 SBP 55 129

Links

Other SBP family TFs
Other Cicer arietinum TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_2g078770 Medicago truncatula MTR_2g078770 I 0.973
GLYMA13G35000 Glycine max GLYMA13G35000 I 0.965
GLYMA12G35460 Glycine max GLYMA12G35460 I 0.965
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I 0.947
28211.m000132 Ricinus communis 28211.m000132 I 0.942
VIT_19s0014g02350 Vitis vinifera VIT_19s0014g02350 I 0.942
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.940
PK22320.1 Cannabis sativa PK22320.1 D 0.940
TCM_031595 Theobroma cacao TCM_031595 I 0.937
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.937
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.937
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.936
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.936
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.935
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.935
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.934
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.931
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.930
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.930
Ca_16243 Cicer arietinum Ca_16243 I 0.929
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.929
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.929
MDP0000158607 Malus domestica MDP0000158607 I 0.927
Cla002263 Citrullus lanatus Cla002263 I 0.927
Bostr.28625s0189 Boechera stricta Bostr.28625s0189 I 0.927
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.926
Thhalv10021617m.g Eutrema salsugineum Thhalv10021617m.g I 0.923
Pm011381 Prunus mume Pm011381 I 0.921
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.921
Bra027265 Brassica rapa Bra027265 I 0.920
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.920
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.920
Bo5g127310 Brassica oleracea Bo5g127310 I 0.920
Bra038101 Brassica rapa Bra038101 I 0.920
cassava31252.valid.m1 Manihot esculenta cassava31252.valid.m1 I 0.919
SPL4 Arabidopsis thaliana AT1G53160 D 0.919
Thhalv10011728m.g Eutrema salsugineum Thhalv10011728m.g I 0.919
AMTR_s00062p00211520 Amborella trichopoda AMTR_s00062p00211520 I 0.917
Bostr.0124s0106 Boechera stricta Bostr.0124s0106 I 0.916
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.915
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I 0.915
SPL4 Arabidopsis lyrata fgenesh2_kg.1__4389__AT1G53160.2 I 0.915
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.915
Solyc05g053240.2 Solanum lycopersicum Solyc05g053240.2 I 0.914
PGSC0003DMG400027151 Solanum tuberosum PGSC0003DMG400027151 I 0.914
Cla023735 Citrullus lanatus Cla023735 I 0.914
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I 0.912
MTR_2g046550 Medicago truncatula MTR_2g046550 I 0.912
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I 0.912
Bo2g091010 Brassica oleracea Bo2g091010 I 0.912
29983.m003158 Ricinus communis 29983.m003158 I 0.912
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.912
POPTR_0010s16370 Populus trichocarpa POPTR_0010s16370 I 0.912
Bra015732 Brassica rapa Bra015732 I 0.911
Gorai.005G071400 Gossypium raimondii Gorai.005G071400 I 0.911
Ca_18591 Cicer arietinum Ca_18591 I 0.911
Bo6g120690 Brassica oleracea Bo6g120690 I 0.911
GLYMA07G36180 Glycine max GLYMA07G36180 I 0.911
Bra025863 Brassica rapa Bra025863 I 0.909
Bo6g029290 Brassica oleracea Bo6g029290 I 0.908
Carubv10008169m.g Capsella rubella Carubv10008169m.g I 0.908
Eucgr.E03260 Eucalyptus grandis Eucgr.E03260 I 0.908
SapurV1A.0016s0070 Salix purpurea SapurV1A.0016s0070 I 0.908
Bostr.7128s0689 Boechera stricta Bostr.7128s0689 I 0.908
SapurV1A.0554s0130 Salix purpurea SapurV1A.0554s0130 I 0.908
Carubv10012577m.g Capsella rubella Carubv10012577m.g I 0.908
POPTR_0005s28010 Populus trichocarpa POPTR_0005s28010 I 0.908
SPL14 Arabidopsis thaliana AT1G20980 D 0.908
SPL14 Arabidopsis lyrata fgenesh2_kg.1__2292__AT1G20980.1 I 0.908
Bostr.20129s0096 Boechera stricta Bostr.20129s0096 I 0.908
TCM_034803 Theobroma cacao TCM_034803 I 0.908
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.907
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.907
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.907
MTR_7g110320 Medicago truncatula MTR_7g110320 I 0.906
Carubv10014636m.g Capsella rubella Carubv10014636m.g I 0.906
Ca_01036 Cicer arietinum Ca_01036 I 0.906
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I 0.906
SPL12 Arabidopsis thaliana AT3G60030 D 0.906
POPTR_0002s00440 Populus trichocarpa POPTR_0002s00440 D 0.905
Bo5g030930 Brassica oleracea Bo5g030930 I 0.905
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.904
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.904
GLYMA17G04400 Glycine max GLYMA17G04400 I 0.903
MDP0000156994 Malus domestica MDP0000156994 I 0.903
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.903
MDP0000861601 Malus domestica MDP0000861601 I 0.903
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.903
Eucgr.K01046 Eucalyptus grandis Eucgr.K01046 I 0.902
OB04G27960 Oryza brachyantha OB04G27960 I 0.902
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.901
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.901
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.901
OBART04G20940 Oryza barthii OBART04G20940 I 0.900
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.900
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.900
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.900
SPL7 Oryza sativa OS04G0551500 I 0.900
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.900
TCM_008150 Theobroma cacao TCM_008150 I 0.900
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.900
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.900
SPL5 Arabidopsis thaliana AT3G15270 D 0.900
Cagra.1472s0017 Capsella grandiflora Cagra.1472s0017 I 0.900
Carubv10010422m.g Capsella rubella Carubv10010422m.g I 0.900
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.900
Gorai.002G112200 Gossypium raimondii Gorai.002G112200 I 0.899
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.898
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.897
Pm014154 Prunus mume Pm014154 I 0.897
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.897
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.897
MDP0000919693 Malus domestica MDP0000919693 I 0.896
Pm010075 Prunus mume Pm010075 I 0.896
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.896
scaffold_202615.1 Arabidopsis lyrata scaffold_202615.1 I 0.896
Si034095m.g Setaria italica Si034095m.g I 0.896
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.896
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I 0.896
AT1G76580 Arabidopsis thaliana AT1G76580 D 0.896
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.896
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.896
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.896
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.896
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.896
TRIUR3_31982 Triticum urartu TRIUR3_31982 I 0.895
F775_27970 Aegilops tauschii F775_27970 I 0.895
Traes_7DS_AB399594E Triticum aestivum Traes_7DS_AB399594E I 0.895
BRADI3G40240 Brachypodium distachyon BRADI3G40240 I 0.895
Traes_7AS_0F019FB93 Triticum aestivum Traes_7AS_0F019FB93 I 0.895
MLOC_4792 Hordeum vulgare MLOC_4792 I 0.895
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.894
SPL6 Oryza sativa OS03G0833300 I 0.894
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.894
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.894
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.894
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.894
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.894
OB03G47050 Oryza brachyantha OB03G47050 I 0.894
OBART03G39900 Oryza barthii OBART03G39900 I 0.894
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.894
Bo4g005730 Brassica oleracea Bo4g005730 I 0.893
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.893
F775_31139 Aegilops tauschii F775_31139 I 0.893
Bra041037 Brassica rapa Bra041037 I 0.893
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.893
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.893
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.893
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.893
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.893
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.893
LPERR08G17180 Leersia perrieri LPERR08G17180 I 0.892
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.892
PDK_20s1709081g002 Phoenix dactylifera PDK_20s1709081g002 I 0.892
AMTR_s00022p00106940 Amborella trichopoda AMTR_s00022p00106940 I 0.892
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.891
mgf011616m Mimulus guttatus mgf011616m I 0.891
TCM_004922 Theobroma cacao TCM_004922 I 0.891
MDP0000149339 Malus domestica MDP0000149339 I 0.891
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.891
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.891
gene00196-v1.0-hybrid Fragaria vesca gene00196-v1.0-hybrid I 0.891
Bra039656 Brassica rapa Bra039656 I 0.890
Bo6g031220 Brassica oleracea Bo6g031220 I 0.890
PK06791.1 Cannabis sativa PK06791.1 D 0.889
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.889
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.889
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.889
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.889
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.889
Ca_03548 Cicer arietinum Ca_03548 I 0.889
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.889
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.889
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.889
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.889
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.889
30076.m004574 Ricinus communis 30076.m004574 I 0.889
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.889
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.888
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.888
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.888
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.888
PRUPE_ppa000682mg Prunus persica PRUPE_ppa000682mg D 0.887
OB08G27190 Oryza brachyantha OB08G27190 I 0.887
Pm022881 Prunus mume Pm022881 I 0.887
29889.m003388 Ricinus communis 29889.m003388 I 0.887
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I 0.886
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.886
MDP0000180408 Malus domestica MDP0000180408 I 0.886
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.886
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.886
gw1.313.30.1 Physcomitrella patens gw1.313.30.1 I 0.886