MDP0000271587 (Malus domestica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 MDP0000271587 T323581_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN

NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
0.946 0.827
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG

CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
0.946 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000271587 SBP 142 216

Links

Other SBP family TFs
Other Malus domestica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
EIL4 Arabidopsis thaliana AT5G10120 N 0.000
Bo2g009710 Brassica oleracea Bo2g009710 N 0.000
Bra028601 Brassica rapa Bra028601 N 0.000
Carubv10000964m.g Capsella rubella Carubv10000964m.g N 0.000
fgenesh2_kg.6__972__AT5G10120.1 Arabidopsis lyrata fgenesh2_kg.6__972__AT5G10120.1 N 0.000
Thhalv10015634m.g Eutrema salsugineum Thhalv10015634m.g N 0.000