CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMEC018109
(
Anopheles melas
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
AMEC018109
T325513_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.944
0.944
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.944
0.944
Smad4
M05889_2.00
Mus musculus
KCYAGACR
YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
0.926
0.926
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
0.926
0.926
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
0.926
0.926
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS
SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
0.926
0.926
SMAD4
M11275_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
0.926
0.926
SMAD4
M11276_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
0.926
0.926
SMAD4
M11277_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
0.926
0.926
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEC018109-PA
SMAD
1
54
VAGRKGFPHVIYARIWRWPDLHKNELKHVKFCQFAFDLKCDSVCVNPYHYERVL
Links
Other
SMAD
family TFs
Other
Anopheles melas
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP19585
Atta cephalotes
ACEP19585
I
0.963
LDEC015949
Leptinotarsa decemlineata
LDEC015949
I
0.963
TC010848
Tribolium castaneum
TC010848
I
0.963
MDOA012885
Musca domestica
MDOA012885
I
0.944
GM16436
Drosophila sechellia
FBgn0171351
I
0.944
GL23637
Drosophila persimilis
FBgn0161227
I
0.944
GI23400
Drosophila mojavensis
FBgn0146126
I
0.944
GK11724
Drosophila willistoni
FBgn0213735
I
0.944
GE10952
Drosophila yakuba
FBgn0228782
I
0.944
LCUP007928
Lucilia cuprina
LCUP007928
I
0.944
Ogr06720
Ophisaurus gracilis
Ogr06720
I
0.944
GH18642
Drosophila grimshawi
FBgn0126109
I
0.944
AALB009485
Anopheles albimanus
AALB009485
I
0.944
GJ23092
Drosophila virilis
FBgn0210194
I
0.944
ENSONIG00000001557
Oreochromis niloticus
ENSONIG00000001557
I
0.944
ADAC007516
Anopheles darlingi
ADAC007516
I
0.944
GG11819
Drosophila erecta
FBgn0104114
I
0.944
Med
Drosophila melanogaster
FBgn0011655
D
0.944
GF22974
Drosophila ananassae
FBgn0099968
I
0.944
GA14643
Drosophila pseudoobscura
FBgn0074670
I
0.944
Ocbimv22032358m.g
Octopus bimaculoides
Ocbimv22032358m.g
I
0.926
SMAD4
Danio rerio
ENSDARG00000012649
I
0.926
SMAD4
Sorex araneus
ENSSARG00000013883
I
0.926
CapteG179368
Capitella teleta
CapteG179368
I
0.907
CGI_10018464
Crassostrea gigas
CGI_10018464
I
0.875
smad4
Ciona intestinalis
ENSCING00000005559
I
0.870
nDi.2.2.2.g01429
Dirofilaria immitis
nDi.2.2.2.g01429
I
0.870
OFLC_0001382401
Onchocerca flexuosa
OFLC_0001382401
I
0.870
ENSGMOG00000013964
Gadus morhua
ENSGMOG00000013964
I
0.870
ASIM_0001604001
Anisakis simplex
ASIM_0001604001
I
0.870
ASU_13433
Ascaris suum
ASU_13433
I
0.852
Minc15475
Meloidogyne incognita
Minc15475
N
0.778
HCOI00676200
Haemonchus contortus
HCOI00676200
I
0.778
genemark-nMf.1.1.scaf08549-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf08549-processed-gene-0.3
N
0.778
L889_g28104
Steinernema feltiae
L889_g28104
I
0.759
SMAD4
Homo sapiens
ENSG00000141646
D
0.741
SNAPOd2T00000278001
Oikopleura dioica
SNAPOd2T00000278001
N
0.722