Bo7g091510 (Brassica oleracea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Bo7g091510 T326665_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g091510.1 Sox 558 626

Links

Other Sox family TFs
Other Brassica oleracea TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra025350 Brassica rapa Bra025350 N 0.709
Bra033055 Brassica rapa Bra033055 N 0.608
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.530
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.527
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.520
29822.m003476 Ricinus communis 29822.m003476 I 0.519
mgf024995m Mimulus guttatus mgf024995m I 0.506
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.505
SSRP1 Arabidopsis thaliana AT3G28730 I 0.501
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.501
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.501
Lus10018073.g Linum usitatissimum Lus10018073.g N 0.494
Lus10042065.g Linum usitatissimum Lus10042065.g N 0.494
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.474
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.473
PIIN_05794 Piriformospora indica PIIN_05794 I 0.470
MDP0000828844 Malus domestica MDP0000828844 I 0.470
gene01264-v1.0-hybrid Fragaria vesca gene01264-v1.0-hybrid I 0.470
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I 0.469
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I 0.469
PK18077.1 Cannabis sativa PK18077.1 I 0.469
Ca_12487 Cicer arietinum Ca_12487 I 0.469
M408DRAFT_328926 Serendipita vermifera M408DRAFT_328926 I 0.468
Ca_10804 Cicer arietinum Ca_10804 I 0.466
Pm015842 Prunus mume Pm015842 I 0.464
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.464
TCM_018380 Theobroma cacao TCM_018380 I 0.455
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.452
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.452
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.448
Cla017295 Citrullus lanatus Cla017295 I 0.448
Cucsa.339070 Cucumis sativus Cucsa.339070 I 0.448
ATHMG Vitis vinifera VIT_14s0108g00040 I 0.447
MDP0000310093 Malus domestica MDP0000310093 I 0.446
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.441
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.441
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.441
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.440
orange1.1g006512m.g Citrus sinensis orange1.1g006512m.g I 0.437
Ciclev10011266m.g Citrus clementina Ciclev10011266m.g I 0.437
gene01265-v1.0-hybrid Fragaria vesca gene01265-v1.0-hybrid I 0.436
MTR_1g022345 Medicago truncatula MTR_1g022345 I 0.433
GLYMA03G03771 Glycine max GLYMA03G03771 N 0.433
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N 0.432
Aquca_002_00505 Aquilegia coerulea Aquca_002_00505 I 0.429
ENSGMOG00000010503 Gadus morhua ENSGMOG00000010503 N 0.429
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.427
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.427
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.422
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.421
D915_02473 Fasciola hepatica D915_02473 N 0.418