CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000009475
(
Gadus morhua
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSGMOG00000009475
T328195_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000010127
Sox
112
180
PKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKQKYITEFQREKESFEKNMARFK
ENSGMOP00000010127
Sox
196
264
PEKPKTPQQLWYNHEKKTYMKLHPEVSQKELKEALRRQWSQLLDKKRLKWISKALELQKDYGDSMRVYH
ENSGMOP00000010127
Sox
296
359
TKPPPNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQRKKQYDVDLQRF
ENSGMOP00000010127
Sox
447
496
YLAKYRSDRKKAQSAMEGAWRSMEKKEKIPWIKKAAEDQKRYEVQYQAVR
ENSGMOP00000010127
Sox
519
586
PKKPPVSGYQMFSQELLTNGELNRLSLKERMVEIGKRWHKLSLAHKDKYKKMVEEQQVEYKAELDSWV
Links
Other
Sox
family TFs
Other
Gadus morhua
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ubtfl
Takifugu rubripes
ENSTRUG00000009527
N
0.666
ubtfl
Tetraodon nigroviridis
ENSTNIG00000003066
N
0.666
ubtfl
Danio rerio
ENSDARG00000038780
N
0.656
ENSXMAG00000012822
Xiphophorus maculatus
ENSXMAG00000012822
N
0.648
ubtfl
Gasterosteus aculeatus
ENSGACG00000001504
N
0.646
ENSONIG00000014037
Oreochromis niloticus
ENSONIG00000014037
N
0.645
ENSLACG00000008118
Latimeria chalumnae
ENSLACG00000008118
N
0.584
1715211A
Xenopus laevis
1715211A
N
0.541
ubtf.L
Xenopus laevis
XB-GENE-6254049
N
0.539
ENSLOCG00000010224
Lepisosteus oculatus
ENSLOCG00000010224
N
0.481