ubtfl (Takifugu rubripes)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTRUG00000009527 T329311_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023939 Sox 112 180
ENSTRUP00000023939 Sox 196 264
ENSTRUP00000023939 Sox 296 359
ENSTRUP00000023939 Sox 418 464
ENSTRUP00000023939 Sox 482 549
ENSTRUP00000023940 Sox 93 161
ENSTRUP00000023940 Sox 177 245
ENSTRUP00000023940 Sox 277 340
ENSTRUP00000023940 Sox 473 519
ENSTRUP00000023940 Sox 537 604
ENSTRUP00000023941 Sox 93 161
ENSTRUP00000023941 Sox 177 245
ENSTRUP00000023941 Sox 277 340
ENSTRUP00000023941 Sox 473 519
ENSTRUP00000023941 Sox 537 604
ENSTRUP00000023942 Sox 114 182
ENSTRUP00000023942 Sox 198 266
ENSTRUP00000023942 Sox 298 361
ENSTRUP00000023942 Sox 458 499
ENSTRUP00000023942 Sox 528 595
ENSTRUP00000023943 Sox 93 161
ENSTRUP00000023943 Sox 240 303
ENSTRUP00000023943 Sox 434 475

Links

Other Sox family TFs
Other Takifugu rubripes TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ubtfl Tetraodon nigroviridis ENSTNIG00000003066 N 0.740
ENSONIG00000014037 Oreochromis niloticus ENSONIG00000014037 N 0.666
ENSGMOG00000009475 Gadus morhua ENSGMOG00000009475 N 0.666
ENSXMAG00000012822 Xiphophorus maculatus ENSXMAG00000012822 N 0.661
ubtfl Danio rerio ENSDARG00000038780 N 0.657
ubtfl Gasterosteus aculeatus ENSGACG00000001504 N 0.655
ENSLACG00000008118 Latimeria chalumnae ENSLACG00000008118 N 0.580
ubtf.L Xenopus laevis XB-GENE-6254049 N 0.547
1715211A Xenopus laevis 1715211A N 0.544
ENSLOCG00000010224 Lepisosteus oculatus ENSLOCG00000010224 N 0.500
ENSPFOG00000010734 Poecilia formosa ENSPFOG00000010734 N 0.426