AABR07040430.1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000056486 T329080_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000069792 Sox 2 40
ENSRNOP00000069792 Sox 54 122

Links

Other Sox family TFs
Other Rattus norvegicus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N 0.489
HMGB1 Tupaia belangeri ENSTBEG00000013046 N 0.488
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N 0.480
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.480
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N 0.469
ENSTGUG00000006267 Taeniopygia guttata ENSTGUG00000006267 N 0.468
Gfo_R010508 Geospiza fortis Gfo_R010508 N 0.468
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N 0.466
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.466
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.464
Alligator_sinensis_CCG007907.1 Alligator sinensis Alligator_sinensis_CCG007907.1 N 0.460
HMGB2 Ornithorhynchus anatinus ENSOANG00000029120 N 0.460
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.458
ENSETEG00000016379 Echinops telfairi ENSETEG00000016379 N 0.448
ENSMMUG00000018606 Macaca mulatta ENSMMUG00000018606 N 0.446
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.444
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.441
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N 0.440
AFAF009984 Anopheles farauti AFAF009984 N 0.437
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.437
GL15829 Drosophila persimilis FBgn0153433 N 0.433
ASTEI11547 Anopheles stephensi ASTEI11547 N 0.433
AABR07041586.2 Rattus norvegicus ENSRNOG00000052769 N 0.429
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N 0.425
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N 0.424
ENSPTRG00000013662 Pan troglodytes ENSPTRG00000013662 N 0.423
ECPE_0001091201 Echinostoma caproni ECPE_0001091201 N 0.422
csin104030 Clonorchis sinensis csin104030 N 0.422
Ocbimv22036873m.g Octopus bimaculoides Ocbimv22036873m.g N 0.416
MESCA001453 Megaselia scalaris MESCA001453 N 0.416