AC127605.1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000033156 T329054_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000045913 Sox 9 78
ENSRNOP00000045913 Sox 92 160
ENSRNOP00000047700 Sox 11 80
ENSRNOP00000047700 Sox 94 162

Links

Other Sox family TFs
Other Rattus norvegicus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N 0.571
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N 0.565
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.559
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.548
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.544
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.543
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N 0.543
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.531
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N 0.511
AABR07030543.1 Rattus norvegicus ENSRNOG00000051634 N 0.511
AABR07040480.1 Rattus norvegicus ENSRNOG00000057407 N 0.504
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.440
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.434
A_00070 Schistosoma haematobium A_00070 N 0.434
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.434
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.434
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.431
Smp_100090 Schistosoma mansoni Smp_100090 N 0.431
AABR07041586.2 Rattus norvegicus ENSRNOG00000052769 N 0.430
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.426
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.426
TsM_000746700 Taenia solium TsM_000746700 N 0.426
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.426
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.426
AABR07040430.1 Rattus norvegicus ENSRNOG00000056486 N 0.424
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.422
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.419
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.418
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.417
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.417
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.417
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.417
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.417
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.417
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.417
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.415
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.415
hmgb3b Danio rerio ENSDARG00000006408 N 0.415