cassava6450.valid.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava6450.valid.m1 T333946_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava6450.valid.m1 Sox 16 75

Links

Other Sox family TFs
Other Manihot esculenta TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HCM1 Saccharomyces cerevisiae YCR065W D 0.000
VDBG_06876 Verticillium albo atrum VDBG_06876 I 0.000
NDAI_0I00410 Naumovozyma dairenensis NDAI_0I00410 I 0.000
TBLA_0F04070 Tetrapisispora blattae TBLA_0F04070 I 0.000
TBLA_0I02350 Tetrapisispora blattae TBLA_0I02350 I 0.000
VDAG_05936 Verticillium dahliae VDAG_05936 I 0.000
VDBG_06876 Verticillium alfalfae VDBG_06876 I 0.000
VHEMI05130 Torrubiella hemipterigena VHEMI05130 I 0.000
X797_001845 Metarhizium robertsii X797_001845 I 0.000
ZBAI_02769 Zygosaccharomyces bailii ZBAI_02769 I 0.000
ZBAI_09018 Zygosaccharomyces bailii ZBAI_09018 I 0.000
ZYRO0D08426g Zygosaccharomyces rouxii ZYRO0D08426g I 0.000
1820_Multiple Saccharomyces mikatae 1820_Multiple I 0.000
2649_YCR065W Saccharomyces paradoxus 2649_YCR065W I 0.000
NCAS_0D04530 Naumovozyma castellii NCAS_0D04530 I 0.000
MGU_02028 Metarhizium guizhouense MGU_02028 I 0.000
CAGL0J03608g Candida glabrata CAGL0J03608g I 0.000
CCM_02646 Cordyceps militaris CCM_02646 I 0.000
CFIO01_12634 Colletotrichum fioriniae CFIO01_12634 I 0.000
CPUR_04750 Claviceps purpurea CPUR_04750 I 0.000
KNAG_0I02890 Kazachstania naganishii KNAG_0I02890 I 0.000
KUCA_T00001016001 Kuraishia capsulata KUCA_T00001016001 I 0.000
LALA0_S02e07250g Lachancea lanzarotensis LALA0_S02e07250g I 0.000
MAC_03141 Metarhizium acridum MAC_03141 I 0.000
MAJ_01335 Metarhizium majus MAJ_01335 I 0.000
MAM_06988 Metarhizium album MAM_06988 I 0.000
MANI_006610 Metarhizium anisopliae MANI_006610 I 0.000
MBR_01353 Metarhizium brunneum MBR_01353 I 0.000
2876_YCR065W Saccharomyces bayanus 2876_YCR065W I 0.000
BOTBODRAFT_74583 Botryobasidium botryosum BOTBODRAFT_74583 N 0.000