gw1.1.800.1 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.1.800.1 T334231_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.1.800.1 Sox 21 82

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_29503 Selaginella moellendorffii SELMODRAFT_29503 I 0.480
SELMODRAFT_8183 Selaginella moellendorffii SELMODRAFT_8183 I 0.470
RO3G_04704 Rhizopus oryzae RO3G_04704 I 0.446
est_cluster_kg.Chr_07__66__3199198:1 Micromonas sp RCC299 est_cluster_kg.Chr_07__66__3199198:1 N 0.441
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.441
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.440
EuGene.0000050349 Micromonas pusilla EuGene.0000050349 I 0.439
EMIHUDRAFT_434306 Emiliania huxleyi EMIHUDRAFT_434306 N 0.434
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.432