fgenesh2_pg.C_Chr_03000283 (Micromonas sp RCC299)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh2_pg.C_Chr_03000283 T334507_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
99502 Sox 1055 1098

Links

Other Sox family TFs
Other Micromonas sp RCC299 TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI006465 Acyrthosiphon pisum ACYPI006465 N 0.498
fgenesh1_pm.9__12 Bigelowiella natans fgenesh1_pm.9__12 N 0.503
CapteG178344 Capitella teleta CapteG178344 N 0.433
CAOG_02676 Capsaspora owczarzaki CAOG_02676 N 0.438
CC1G_06617 Coprinopsis cinerea CC1G_06617 N 0.507
L804_03818 Cryptococcus gattii L804_03818 N 0.492
CNG00580 Cryptococcus neoformans CNG00580 N 0.556
DAPPUDRAFT_306626 Daphnia pulex DAPPUDRAFT_306626 N 0.437
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.507
GLOTRDRAFT_11089 Gloeophyllum trabeum GLOTRDRAFT_11089 I 0.434
GUITHDRAFT_163519 Guillardia theta GUITHDRAFT_163519 I 0.422
e_gw1.1.2342.1 Heterobasidion annosum e_gw1.1.2342.1 I 0.432
HETIRDRAFT_308278 Heterobasidion irregulare HETIRDRAFT_308278 I 0.432
K443DRAFT_87716 Laccaria amethystina K443DRAFT_87716 N 0.467
LACBIDRAFT_301226 Laccaria bicolor LACBIDRAFT_301226 N 0.433
LDEC009506 Leptinotarsa decemlineata LDEC009506 N 0.510
LotgiG105193 Lottia gigantea LotgiG105193 N 0.483
MGG_00866 Magnaporthe oryzae MGG_00866 N 0.441
MDP0000392251 Malus domestica MDP0000392251 N 0.417
Moror_16065 Moniliophthora roreri Moror_16065 I 0.439
fgenesh2_pg.scaffold_5000103 Monosiga brevicollis fgenesh2_pg.scaffold_5000103 N 0.515
MYCTH_2308522 Myceliophthora thermophila MYCTH_2308522 I 0.459
fgeneshHS_pg.scaffold_50000080 Naegleria gruberi fgeneshHS_pg.scaffold_50000080 N 0.466
NV14872 Nasonia vitripennis NV14872 N 0.420
ENSPMAG00000002918 Petromyzon marinus ENSPMAG00000002918 N 0.462
PISMIDRAFT_671062 Pisolithus microcarpus PISMIDRAFT_671062 I 0.436
M404DRAFT_998370 Pisolithus tinctorius M404DRAFT_998370 N 0.505
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.428
PODANS_5_8400 Podospora anserina PODANS_5_8400 N 0.420
PFL1_06190 Pseudozyma flocculosa PFL1_06190 I 0.422
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.452
SCHCODRAFT_73620 Schizophyllum commune SCHCODRAFT_73620 N 0.421
SPOG_02196 Schizosaccharomyces cryophilus SPOG_02196 N 0.438
SOCG_00309 Schizosaccharomyces octosporus SOCG_00309 N 0.418
SPBC19G7.04 Schizosaccharomyces pombe SPBC19G7.04 N 0.467
TCM_029514 Theobroma cacao TCM_029514 N 0.419
TC012902 Tribolium castaneum TC012902 N 0.515
TRIVIDRAFT_16124 Trichoderma virens TRIVIDRAFT_16124 N 0.427
TriadG56122 Trichoplax adhaerens TriadG56122 N 0.453
M407DRAFT_16670 Tulasnella calospora M407DRAFT_16670 N 0.423
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.442